Gene Dfer_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5194 
Symbol 
ID8228804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6262940 
End bp6263575 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID644933043 
ProductPeroxidase 
Protein accessionYP_003089557 
Protein GI255038936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.600371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.125257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTC GATTAGGAGA TATCGCACCG GACTTTGAAG CAAATACCAC GCAGGGACCC 
ATTAAATTCC ACGAATGGCT GGGAGATAGC TGGGGATTGT TGTTCTCTCA CCCGGCCGAC
TTTACGCCTG TTTGTACAAC TGAATTGGGT AAAACAGCGC TGCTGAAAGG TGAATTTGAA
AAACGCAATG TGAAAGTGCT CGCGGTGAGC GTCGACGACC TGGATTCGCA TAACCGCTGG
ATACCGGATA TCAACGAGGT AAACGATACG GAAGTGAACT TCCCGATCAT CGCCGACGAA
GGCCGCCAGG TAGCACAGCT ATATGATATG ATCCACCCGA ACGCCAGCGA AAAAGCGACG
GTACGCTCGG TATTCGTGAT CGGCCCGGAC AAGAAGATCA AGCTTACCCT TACTTATCCT
GCATCGACAG GCCGTAATTT CAACGAAATC CTCCGCGTGG TGGATTCCTT GCAGCTGACG
GCAAACTACT CGGTAGCCAC ACCGGCCGAC TGGAAAGACG GCGAGGATGT GATCGTGGTG
CCGGCGGTAA GCACCGAAGA CGCCCAGAAG AAGTTCACCA AGGGTTTGAA TATCGTGAAG
CCGTATTTGC GCTACACACC GCAACCGAAC AAGTAA
 
Protein sequence
MSLRLGDIAP DFEANTTQGP IKFHEWLGDS WGLLFSHPAD FTPVCTTELG KTALLKGEFE 
KRNVKVLAVS VDDLDSHNRW IPDINEVNDT EVNFPIIADE GRQVAQLYDM IHPNASEKAT
VRSVFVIGPD KKIKLTLTYP ASTGRNFNEI LRVVDSLQLT ANYSVATPAD WKDGEDVIVV
PAVSTEDAQK KFTKGLNIVK PYLRYTPQPN K