Gene Dfer_5192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5192 
Symbol 
ID8228802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6259855 
End bp6261033 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content55% 
IMG OID644933042 
Productaminotransferase class V 
Protein accessionYP_003089556 
Protein GI255038935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.34588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTGC CTGTTTATTT GGACAATAAT GCTACAACCC CTGTGGACCC GAGGGTTTTA 
CAGGAAATGC TGCCCTATTT TTCCGAGAAA TTCGGCAATG CGGCCAGTCG TACGCATTTG
TATGGCTGGG AGGCGGAAGA ATCGGTGGAT ATTGCACGCG AGCAGATCGC CGGCCTCATT
GGCGCACACC AGCAGGAGAT TGTGTTTACC TCCGGTGCTA CCGAGGGCGT CAATCTGGCC
ATTAAAGGCA TTTTCGAAAA TTCCTTACAA CCGGAGAAAC ACATCATCAC CGTCGCTACC
GAACACAAAG CGGTGCTCGA CACCTGCAAG CATATCGAAC GGCTCGGCGG TACAGTTACC
TACCTGCCCG TGAATGCCAA CGGGCTGATC GACCTGACCG CGCTTGAAAG CGCCATTACC
CCGCACACGA TCCTGATCGC GGTGATGTAC GCCAACAATG AAACCGGCGT GATCCAGCCT
ATCCGTGAGA TTGCTGCCAT TGCCAAATCA CACCACATTC CCTTCCTGTC CGACGCCACG
CAAGCTGTGG GCAAGGTCCC CGTGAATGTC CTGAGCGACG GCATCGACCT GCTTGCATTA
AGTGCGCACA AAATTTACGG GCCCAAAGGC GTGGGCGCAC TCTACGTCCG CAAAAAGAAC
CCCGCCATTA TCCTCACCGC CCAGATCGAC GGCGGCGGCC ACGAACGCAA TATGCGTAGC
GGCACGCTCA ATGTGCCGGG GATCGTCGGG CTTGGCTGGG CCTGTGAAAT TGCCGGGGCC
GAAATGGCGC GGGAAAGCAA GCGGCTCAGC GCACTGCGGA ATGCGTTGGA AGTGGAACTA
TTGGTACTGC AAGATATCGA GATCAATGCC GAAGACGCCC GCCGGCTGCC GCATTGTACC
AATATTTCGT TCGGACAGGT GGATGGGGAG AAACTGATTT TCGAGGCGGG CAGCGACCTG
GCGTTTTCGC GCAGCTCGGC CTGCACCTCC GCCACACTGG AACCCAGCTA TGTGCTGAAA
GCGATGGGCC TTTCGGACGA ACGCATTCAT AATTCGTTCC GTTTCAGTTT CGGACGGTTT
TCTACCGAGG AGCATGTAAA CCACGCGGTT TCTGTTATTT CAAAGATTGT AAAACAACAT
CGCCATGAAA GAAATCACGG ACATCATCCG GTCGTATGA
 
Protein sequence
MKLPVYLDNN ATTPVDPRVL QEMLPYFSEK FGNAASRTHL YGWEAEESVD IAREQIAGLI 
GAHQQEIVFT SGATEGVNLA IKGIFENSLQ PEKHIITVAT EHKAVLDTCK HIERLGGTVT
YLPVNANGLI DLTALESAIT PHTILIAVMY ANNETGVIQP IREIAAIAKS HHIPFLSDAT
QAVGKVPVNV LSDGIDLLAL SAHKIYGPKG VGALYVRKKN PAIILTAQID GGGHERNMRS
GTLNVPGIVG LGWACEIAGA EMARESKRLS ALRNALEVEL LVLQDIEINA EDARRLPHCT
NISFGQVDGE KLIFEAGSDL AFSRSSACTS ATLEPSYVLK AMGLSDERIH NSFRFSFGRF
STEEHVNHAV SVISKIVKQH RHERNHGHHP VV