Gene Dfer_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5174 
Symbol 
ID8228784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6239382 
End bp6239789 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content52% 
IMG OID644933024 
Productresponse regulator receiver protein 
Protein accessionYP_003089538 
Protein GI255038917 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.301225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAT CTTGCTTAGT CTACCTGGTG GACGATGATG CTGATTATCA ATACCTGGTA 
GGCCAAGTAT TCACTATCTT CCTGGCCAAG CACCGCATCC GGTTCTTCGC CAACGGGGCT
GAGCTGGTCA ATGCGATCGA ATCAGCCTCG ATTAACACAG ACGAAATGCC CTCGGCGATC
CTGCTCGATA TCGACATGCC GGACATGGAC GGCTTCCAAA CGCTGACGGC CATCAAACAA
AACCCCATCT GGCAGCAAGT GCACGTCATC ATGATGACAA ACCGCGACCA GCCCGAATAC
CGCGAAGAAT CCGAGCGCCT GGGCGCCCAC GCATTTCTCT TAAAGCCGAT CAGCTTATTT
GAGAGACAAA AAGAAATGAC TCAGATTTGC GAGCGTTACG ACGATTGA
 
Protein sequence
MTGSCLVYLV DDDADYQYLV GQVFTIFLAK HRIRFFANGA ELVNAIESAS INTDEMPSAI 
LLDIDMPDMD GFQTLTAIKQ NPIWQQVHVI MMTNRDQPEY REESERLGAH AFLLKPISLF
ERQKEMTQIC ERYDD