Gene Dfer_5149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5149 
Symbol 
ID8228758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6218165 
End bp6218518 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID644932999 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003089514 
Protein GI255038893 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0918525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATA ACACAACGAG TAACGAGTAT GTACGGGGTA CATTGAAAAC CATCGTGTTG 
AACCTGCTGG CGGAGCACGA CCGGATGTAC GGTTACGAAA TCACCCAGGA AGTTAAAGAT
AGGACAGGCG GCGCGATCGC GCTGACATTC GGTGCGCTGT ATCCCGTGCT CCATAAACTG
GAACAGGAAG GGCTGCTGCT GACGGAGTCG GTGGAAGTGG ACGGGCGTCT GAGAAAATAC
TATTCCCTGA CCCACCGCGG CAATGAAACC GCGCGTACTA AAACCAATGA CTTAGAGCGT
TTTATAGAGG CAGTAAGATT GCTACTCGCC CCTAAAAACC TGGCAACCGA ATAA
 
Protein sequence
MENNTTSNEY VRGTLKTIVL NLLAEHDRMY GYEITQEVKD RTGGAIALTF GALYPVLHKL 
EQEGLLLTES VEVDGRLRKY YSLTHRGNET ARTKTNDLER FIEAVRLLLA PKNLATE