| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5148 |
|---|
| Symbol | |
|---|
| ID | 8228757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6217599 |
|---|
| End bp | 6218069 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644932998 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003089513 |
|---|
| Protein GI | 255038892 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0544097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT ATTCAGATAT TGATAATACC GACCTCCGCA TCCTCTCGCT GTTGATAGAG
AATGCTGCGT TACCGTACAC GGAAATCGGT AAGCGGGTAT TTGTCTCGGG CGGTACAGTG
CACGTGCGCA TGAAAAAGCT GGAACAGATG GGCATCGTCA AAGGCTCTCA GCTCGTCATC
GATCCTACGA AACTCGGCTG GGACATTAGC GCATTCCTGG GGATCTACCT CGATAAGAGT
TCGTTGTATG AGCAAGTTGC GACCGAGCTC GAAGGGATTC CGGAAGTTGT GAATATCCAT
TATACTACCG GAATTTATAG TATCTTTCTT AAAATCGTGT GCAGGGACAC CGGCCACCTC
CGCGAAATCC TTCATGACAA GATCCAAAAG GTAAATGGTA TCCAGCGTAC GGAAACCTTT
ATTTCCCTGG AAGAGCGGAT CAATCGCTCG ATTCCGTTGG CTGAGAGCTA G
|
|---|
| Protein sequence | MQKYSDIDNT DLRILSLLIE NAALPYTEIG KRVFVSGGTV HVRMKKLEQM GIVKGSQLVI
DPTKLGWDIS AFLGIYLDKS SLYEQVATEL EGIPEVVNIH YTTGIYSIFL KIVCRDTGHL
REILHDKIQK VNGIQRTETF ISLEERINRS IPLAES
|
|---|
| |