| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5146 |
|---|
| Symbol | |
|---|
| ID | 8228753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6214524 |
|---|
| End bp | 6215270 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644932994 |
|---|
| Product | protein of unknown function DUF164 |
|---|
| Protein accession | YP_003089511 |
|---|
| Protein GI | 255038890 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA CAATCGCACA AAAACTAGAT GCACTCCTGA AACTTCAGGA AATCGATTCA
AGCCTTGACG AAATACTAAA AACCCGCGGG GACCTGCCGG AAGAAGTAAG GGACCTCGAA
GATGAAATCG CAGGATTCGA AACGCGTTTA GGAAAGTTTA AATCTGAAAT TGCCAATCTG
AATACGGAGA TCGACAATTT CAAAAATGCA CAGAAAGAAG GGGAAAAACT GATCAAGAAA
TACAAAGATC AGCAGATGAA CGTCCGCAAC AACCGCGAAT ACGACGCCAT CACCAAAGAA
ATAGAATTGC AAGAACTTGA TATGCAACTG GCCGACAAGA AGATCAACGA AGCCAGAGCG
CGTATCCGCC TCATCGAAGA AGACGCCAAC CGCGCGGAAT CCATCCTGAA TGAAAGAAAC
GAAGACCTGA AAGTGAAGAA AAATGAACTT TCGGTAATCA CTTCGGAAAG CCAGGCGGAA
GAGCAAGGGC TGATTGCAGA AAGAGAAAAG CACATCAAGA AAATCGAAGA GCGCCTACTG
AAATCCTACC AGAAAATCCG CGACAATTCA CTGAACGGCC TTGCCGTGGT GCATGTGCAG
CGTGGGGCTT GCGGTGGATG TTTCAGCATC GTTCCTCCTC AGCGCCAGGC GGATATCCGC
GAGCGTAAGA AACTGATCGT GTGCGAGCAC TGCGGACGTA TCCTTGCCGA TGTAGAAAGC
GTTCAGCCGG TACACCAGCG TCGCTAA
|
|---|
| Protein sequence | MENTIAQKLD ALLKLQEIDS SLDEILKTRG DLPEEVRDLE DEIAGFETRL GKFKSEIANL
NTEIDNFKNA QKEGEKLIKK YKDQQMNVRN NREYDAITKE IELQELDMQL ADKKINEARA
RIRLIEEDAN RAESILNERN EDLKVKKNEL SVITSESQAE EQGLIAEREK HIKKIEERLL
KSYQKIRDNS LNGLAVVHVQ RGACGGCFSI VPPQRQADIR ERKKLIVCEH CGRILADVES
VQPVHQRR
|
|---|
| |