Gene Dfer_5121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5121 
Symbol 
ID8228728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6184357 
End bp6184923 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID644932969 
Productinorganic pyrophosphatase 
Protein accessionYP_003089486 
Protein GI255038865 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.551351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.430905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGATA AGGCACCCGA ATTAGTTACT GCATTTATTG AGATTGTTCC TACCGATACC 
GTAAAGTACG AAATTGACAA GGCCACCGGT TACCTTAAAA TCGACCGCCC TCAGAAATAT
TCGAACATCG TTCCTGCATT GTACGGCTTC ATTCCCAAAA CCTATTGCGC GGATAAAATC
GCCGCATTGG CGCGTGAGCG TTCCGGTCGC GATGTGACCG AAGGTGATGG TGACCCGCTG
GATATCATTG TATTGTGCGA AAAAATCATT TCACACGGTA ACATCATGTG CGAAGCGAAG
CCTATCGGCG GTATTCGTCT GATCGACGGC GGAGAGGCAG ATGACAAGAT CATCGCCGTG
CTGAAAGGCG ACGAAGTGTA CGGTCAGTTC AACGACCTGA GCGAACTGCC CGACGGTATC
GTGGAGCGTT TGAAGCACTA CTTCCTGACT TACAAAAACC TGCCTGGCGA GAAAGCGCAC
ATTGAAATTA CCAATGTGTA CGGGAAGGAA GAGGCGCACG AAGTGATCCT CACGTCGGTA
GAAGATTACA AGCATTCCTA TTATTGA
 
Protein sequence
MGDKAPELVT AFIEIVPTDT VKYEIDKATG YLKIDRPQKY SNIVPALYGF IPKTYCADKI 
AALARERSGR DVTEGDGDPL DIIVLCEKII SHGNIMCEAK PIGGIRLIDG GEADDKIIAV
LKGDEVYGQF NDLSELPDGI VERLKHYFLT YKNLPGEKAH IEITNVYGKE EAHEVILTSV
EDYKHSYY