Gene Dfer_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5116 
Symbol 
ID8228723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6180012 
End bp6180476 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content54% 
IMG OID644932964 
Producthypothetical protein 
Protein accessionYP_003089481 
Protein GI255038860 
COG category[S] Function unknown 
COG ID[COG4696] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.456316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TGGATAGCCT TAATCAAGTC GCGGATTTTC ACAGAACTTT CAAACACCCG 
ATCCTGGAAA CGCCGACGAT CCCCTCCGAA GAAAGAAGCC GCCTGCGCGT GGCATTGCTC
GCCGAGGAAT TGAAGGAGCT GGAAGTTGCG ATCCTCGAAA AGGACATTGT GGAGGTGGCC
GACGCCCTTT GCGACCTGCA ATACGTGCTT TCCGGCGCGG TGCTGGAATT CGGGCTGGGC
GAGAAGTTCC GGACGCTGTT CGACGAAGTG CAGCGCTCGA ATATGTCCAA AGCGTGCAAC
TCGATGGAAG AAGCCGAAGC GACTGTGGCG CATTACCAGG CCAAAGGCAC GGATTGCTAT
TTCAAGGAAG ATAATGGCAA ATACCTCGTG TACCGCACGG CCGACGACAA GACTTTGAAA
AACATCAATT ATTCGCCGGC TGACCTGGCG TCGATTATCG GTTAG
 
Protein sequence
MQQLDSLNQV ADFHRTFKHP ILETPTIPSE ERSRLRVALL AEELKELEVA ILEKDIVEVA 
DALCDLQYVL SGAVLEFGLG EKFRTLFDEV QRSNMSKACN SMEEAEATVA HYQAKGTDCY
FKEDNGKYLV YRTADDKTLK NINYSPADLA SIIG