| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5113 |
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| Symbol | |
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| ID | 8228720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6177458 |
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| End bp | 6178516 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932961 |
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| Product | aminotransferase class V |
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| Protein accession | YP_003089478 |
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| Protein GI | 255038857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.232116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCT TTTATCCAGG ACCCAGCAAG GTTTATCCAG AGGTCGAACA ATTCATTTCG
GAGGCATTTG CCAGCGGTTT GATCAGCGCC AACCATCGCA GCGAGGTCTT TATGCAGTTG
CTCGAAAAAA CGATCGCGGA CCTAAAAGCG AAACTGGACA TTCCGGCTGG TTACGAAGTG
TACCTCGTGT CGTCGGCCAC CGAATGCTGG GAAATCATCG CGCAATCGCT GCTCATCGAT
TCCAGCCTGC ATATTTACAA CGGCGCATTC GGCGAAAAAT GGATGGAATA TACCCACCGC
ATTTCGCTGC GGACGAGCGA CGCGGCGTTC GGCCTCAACG AAACGTTGCT CATGGACCGT
TCCGCTGTGT TTTCACGCAA TGAACTGATT TGCGTCACGC ATAACGAAAC GTCCAACGGG
ACCAAAATAC CCGAGGACTT CCTGCTCGAC ATTCGTAAGA AAGTCGATAA CCTGATCGCC
GTGGACGCAA CTTCTTCCAT GGCCGGGGTG GTCTTGCCCT GGGAGAATGC GGATGTGTGG
TATGCGTCGG TGCAGAAATG TTTCGGATTA CCGGCCGGTT TGGCGGTGAT GGTCGTTTCG
CCGAAGGCTA TCGAGCGGGC GATCCAGGTG GGAGAACGGA AGCATTACAA TAGCCTGCTG
TTTATACGCG ATAACTTTTT GAAGTTTCAG ACACCCTTTA CCCCCAATAT CCTCGGTATT
TATCTGCTCG GAAAGGTAAT GCAACAGGTC CCGGCCATTG AGCAAACGGA CAAGCAGACC
CGCCGGCGCG CGCACGATTG GTATGCATTC CTGCTCGAAA ACGGTTATGA GCTGGTTGTT
GAAAACACGG CGGTACGTTC CGATACGGTC ATTGCCGTCA GGGAAACGAA AGAGCGGATT
TCGGAGCTGA AAGGCGCTGC GAAAAGGGAG GGCATCACGC TTGGTAACGG CTATGGCAAA
GAGAAGGATA CCAGCTTCCG GATTGCCAAC TTCCCGGCTA TCAGCGATGC GGAAATCGCG
ACGTTGAAGG CTTTTTTGGT GAAAATGGCC GCGTATTGA
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| Protein sequence | MITFYPGPSK VYPEVEQFIS EAFASGLISA NHRSEVFMQL LEKTIADLKA KLDIPAGYEV
YLVSSATECW EIIAQSLLID SSLHIYNGAF GEKWMEYTHR ISLRTSDAAF GLNETLLMDR
SAVFSRNELI CVTHNETSNG TKIPEDFLLD IRKKVDNLIA VDATSSMAGV VLPWENADVW
YASVQKCFGL PAGLAVMVVS PKAIERAIQV GERKHYNSLL FIRDNFLKFQ TPFTPNILGI
YLLGKVMQQV PAIEQTDKQT RRRAHDWYAF LLENGYELVV ENTAVRSDTV IAVRETKERI
SELKGAAKRE GITLGNGYGK EKDTSFRIAN FPAISDAEIA TLKAFLVKMA AY
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