Gene Dfer_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5100 
Symbol 
ID8228707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6159925 
End bp6160668 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID644932948 
Productglycosyl transferase family 2 
Protein accessionYP_003089465 
Protein GI255038844 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.764594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATC TTCTGAGTAT AGTAATGCCC GCATACAATG AGCAGGATTG TATCGAAAAA 
GTAGTTTATA ATTGGACCTC CTTCCTCAAA ACCAAATTCC CCAACGATAA CACTACCCTG
ATCGTCATCA ACGACGGATC GAAAGACAAT ACGAAAGCGT TACTGGATGA GCTGGACAAG
AAGATCGACA ATTTGACGGT CGTTCACCAG AAAAACGGCG GACATGGCAA TGCGGTCGTT
AACGGCTACC GCAAGGCGCT GGAACTCGGC TCGGAATATG TGTTCCAGAC CGACAGCGAC
GACCAGTTCG TTTCCGAAGA CTTTGACAAA CTCTGGGACA AGCGTTCCCA ATCGCAATTC
ATACTCGGCT ACCGCCAGGT GCGGCACGAT GCCGGCGTGC GCCTCTTTAT CACGAAATTT
CTCCGCGGCA CGATCTCGAC TGTGTATGGC ACATTCATCA TGGACAGCAA CATTCCGTTC
CGTCTGATCA AAGGGACATT CCTGCAAAAA CTGATGAACC AGCTGCCCAA CCCGGAGCCG
TTCGCACCGA ACATCTTCCT GGCTGTGATG GCGAAAAAAT CGGGACAGGA GCTGTTCGAC
ATCCCTATCA CCCACAAAGA CCGGGAAACC GGCACCGTTT CGATTGTGAA ATGGAACCTG
TGGAAAGTTT GTATCCGAAG CTTTAAAGAA CTCTTGCGGT TTCGCCTCGA ACTGAATGGT
AAAGTGAAAG CGATCCGCGC TTAA
 
Protein sequence
MSYLLSIVMP AYNEQDCIEK VVYNWTSFLK TKFPNDNTTL IVINDGSKDN TKALLDELDK 
KIDNLTVVHQ KNGGHGNAVV NGYRKALELG SEYVFQTDSD DQFVSEDFDK LWDKRSQSQF
ILGYRQVRHD AGVRLFITKF LRGTISTVYG TFIMDSNIPF RLIKGTFLQK LMNQLPNPEP
FAPNIFLAVM AKKSGQELFD IPITHKDRET GTVSIVKWNL WKVCIRSFKE LLRFRLELNG
KVKAIRA