Gene Dfer_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5087 
Symbol 
ID8228694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6145692 
End bp6146048 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content43% 
IMG OID644932935 
Producthypothetical protein 
Protein accessionYP_003089452 
Protein GI255038831 
COG category[S] Function unknown 
COG ID[COG4634] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000115983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.14262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC TTTGTGACGT TCATATTCCC ATTAAACTGG CGAAGTTTTT GCAAAGTAAA 
GGCCATTCAG CGAAGCATGT AAACCAGTTA CCGGCTAAAT GGCATACCGA TGATTCGGAA
ATTTGCACGG TTGCAGATCA CAACGGATGG ATTGTCATTA CGAAAGATGA AGATTTCCGA
GCTTCGTTCC TTCTTCGCCG GACACCCCGC AAGCTAATCC GTATCAGCCT CGGGAACATT
TCCAACAGTG CATTGATCGA GCTATTTTCG GAGCATCTTG CTTTGATCGA GGATATTGAT
CAACACCAGT ACTTCTATTT CGAACTGGGG AAAATCAATA CCCTCTATAC TTTCTAA
 
Protein sequence
MNFLCDVHIP IKLAKFLQSK GHSAKHVNQL PAKWHTDDSE ICTVADHNGW IVITKDEDFR 
ASFLLRRTPR KLIRISLGNI SNSALIELFS EHLALIEDID QHQYFYFELG KINTLYTF