Gene Dfer_5039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5039 
Symbol 
ID8228645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6091947 
End bp6092885 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content52% 
IMG OID644932887 
ProductAldose 1-epimerase 
Protein accessionYP_003089404 
Protein GI255038783 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTG AAATTTTCAA GCAGCAATTT GGCGACCTCA CCGAATATGT CATACACGAC 
ACCACTACCG AAAACCGCTG CGTAATCATC CCCGAACTGG GTGGGATTGT CCGTCAGCTC
TCGTTACGGA AAGGGCTCAC GCTCTTCTCG CTACTCAAAA CACCCGCCAC ACCGGCCGCG
CTGTTGGCCG ATACAAAAAG TGCCAGCGAA TTACTGTTCC CGTTCGCAAG CCGCATTCCG
GAAGGTAAAT ACAAGTTTTT GGGTAAAAAT TATGAATTGG ATAAAAACGA GGACGGCGGC
TTGAACGCAA TTCATGGCCT AGTCCGGAAG AATCATTTTC ATCTCGACGA GCAGGCTATT
CATGCGGATC ACGCATACAT CCAGCTGTCC TACACGATCG ATAATGCCAA AGGCTATCCA
TTCCTGGTTC ACTTTTCAGT GCGCTACACC CTGCATGCAG ACGGTCGTTT TGAGGTAAAA
TATGAAGCCA AAAACAATGG ACAGGCACCC GCGCCGGCTA TGTTCGGCTG GCACCCCTAC
TGGATGCTCG GCAACGAGGA TGTGGAAGCC TGGAAAATTA ATATTCCCTC GAAACGCCTC
GTGACGTTCA ATGAAAACCT CATTCCGGTT GGCACGGAGC CATTCGAGAT GGCGATGCCG
GCGCTGCTGC ATCGGAGAGA GTTCGATAAT TGCTTCATTG TAGATGCCGG TCCGTACGCT
ACCACGGAGC TGATCTCGAA AAACCAGGAT GTAACGCTTC GCATTGAACA GGAAACGGAG
AAATTCAAAT ACCTGGTCGT ATATACGCCG CCTGCGCGCG ACTGCGTAGC CATCGAACCG
CTTACGGCCA ACGTCGATTC GTTTAACACC GGAGAAGGGC TACAAATTCT GGCGCCCGGC
CATAGCATTG ACGGCACGAT CACCGTCCGC CTCGTTTAA
 
Protein sequence
MSFEIFKQQF GDLTEYVIHD TTTENRCVII PELGGIVRQL SLRKGLTLFS LLKTPATPAA 
LLADTKSASE LLFPFASRIP EGKYKFLGKN YELDKNEDGG LNAIHGLVRK NHFHLDEQAI
HADHAYIQLS YTIDNAKGYP FLVHFSVRYT LHADGRFEVK YEAKNNGQAP APAMFGWHPY
WMLGNEDVEA WKINIPSKRL VTFNENLIPV GTEPFEMAMP ALLHRREFDN CFIVDAGPYA
TTELISKNQD VTLRIEQETE KFKYLVVYTP PARDCVAIEP LTANVDSFNT GEGLQILAPG
HSIDGTITVR LV