Gene Dfer_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5004 
Symbol 
ID8228610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6054334 
End bp6055239 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content52% 
IMG OID644932852 
Producthypothetical protein 
Protein accessionYP_003089369 
Protein GI255038748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.013645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATCTATTATC GATGTCCCTC GCTGCACTGA TGGCGACGGC CTCCGTAGCA 
CAGCGCGTGC CGGCCGCCAG CCCCGCAGCC ACCGTCATGC AAACCGTTGG TGTAACCGAT
TTCACCGTTC AATATTCCCG CCCGTTCATC AAAGGCCGTA AGGTATTCGC CAACAGCTCC
GCGCTCGCTC CTTACGATCA GGTGTGGCGC ACCGGTGCCA ATATGGCCAC CGTTTTCGAA
TCCAGTACCG AGTTTACATT TGGAGGCAAA AAAGTACCTG CGGGCAAGTA TGCATTGTTT
TCCATCCCCA ATGGCTCAGC CTGGACGGTG ATTTTGAATA AAAACTTCAA CCAGGGCGGC
ACCGATAACT ACAAAGAATC CGAAGATGTA GCCCGCACGA TGGTAGTGCC TACCTCCAAC
GAATATAACG AAGCATTCAA AATCGAAATC CAGCCGGTAA CGGACAGCAC GGCGTTTTTG
AACCTTTCAT GGTCGTCTGT GAATGTACCT GTACCTTTGA CCGTAAGCAC CGAGTCGCTT
ACATTGACCG CATTGAACAA AGCCGTGGCG GAGAAGCCCG AGGACGTGGC CACGTTGCAA
AGCACAGCAG GTTACCTGCT TTCGAAAGGC AAGGATTTGC AGGTTGCATT GTCGCTGGCA
GACAAGGCTA TTGGTTTGAA AGAATCATTC GGCGCATTGT GGACCAAAGC GCAGATTTTA
AACAAACTCG GCAAACCCGC CGAAGCGATC CCCGTAGCGC AAAAAGCATT GGCAGTAGGC
GCAGCCAACC CCGACGGCGC TTACAATTTC TACAAGCCGC AGGTTGAGAA GGCAATCGCC
GACATGCAGG CCAAAGCCGC ACCGGTGAAA GAAGCCGCTT CAACCGTTAA AAAGAAGAAA
AAATAG
 
Protein sequence
MKKYLLSMSL AALMATASVA QRVPAASPAA TVMQTVGVTD FTVQYSRPFI KGRKVFANSS 
ALAPYDQVWR TGANMATVFE SSTEFTFGGK KVPAGKYALF SIPNGSAWTV ILNKNFNQGG
TDNYKESEDV ARTMVVPTSN EYNEAFKIEI QPVTDSTAFL NLSWSSVNVP VPLTVSTESL
TLTALNKAVA EKPEDVATLQ STAGYLLSKG KDLQVALSLA DKAIGLKESF GALWTKAQIL
NKLGKPAEAI PVAQKALAVG AANPDGAYNF YKPQVEKAIA DMQAKAAPVK EAASTVKKKK
K