| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4931 |
|---|
| Symbol | |
|---|
| ID | 8228537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5956628 |
|---|
| End bp | 5957488 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644932779 |
|---|
| Product | glycoside hydrolase family 16 |
|---|
| Protein accession | YP_003089296 |
|---|
| Protein GI | 255038675 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.454153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.64066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATA ATAGTCCTTC GCTCATTCCG GGCTTGGTTA TATGCGGATT GGTTATCCTT
AGTGCCGCGG TAAGCTGTGC ACAACTGGCA GAAAAGCCCA AACCAGCCAC ATCACAATAC
ACCTTCGCTC CCACTCCATC CTGGCAGGAC GAATTCGACT ACTCCGGCAA ACCCGATGCC
GCCAAGTGGA GCTACGACCT CGGTGACCAT GGCTGGGGGA ATAATGAGCT GGAAAACTAT
ACCAGCAACA TCGAGAATGC CAAAGTGGAG AATGGCAATC TGGTGATTAC GGCTATTAAG
GAGCCGTCGG GCAAGCAGCA GTACAACTCG GCTAGATTGG TATCGAAAGG TAAAGGAGAT
TTTACCTATG GGAAATTCGA GATCCGCGCG AAGTTGCCGA AGGGCCGGGG TACCTGGCCG
GCGATCTGGA TGCTGGCGAG CGGAAATGAA TATGGCAACA AAGGCTGGCC GGATAATGGC
GAGATCGACA TTATGGAGCA CGTCGGGTTC GACCAGGACC GGCTGCATGG CAATATCCAC
ACCAAGGCCT TTAATCATGC GATCAAGTCC AACAAAGGCA ACAATATCGT CGTGAAGGGA
CTTTCGGAAG ATTTCCATGT GTACACCTGC GAGTGGACGC CCGAAGCGAT CACCATTCTC
GTCGACGGCA ATGCCTATTT TACCTTCAAA AAAGAAGCTT CCTACCAATG GGCGGAATGG
CCGTTCGACA AGCCGTTTCA TTTAATTTTA AATATCGCCG TCGGTGGTAA CTGGGGTGGG
CAAAAGGGCG TGGACGACAG CATTTTCCCG CAAAAAATGA AAGTCGATTA CGTGCGCGTG
TACCCGCTCG TGACGAAGTA G
|
|---|
| Protein sequence | MRDNSPSLIP GLVICGLVIL SAAVSCAQLA EKPKPATSQY TFAPTPSWQD EFDYSGKPDA
AKWSYDLGDH GWGNNELENY TSNIENAKVE NGNLVITAIK EPSGKQQYNS ARLVSKGKGD
FTYGKFEIRA KLPKGRGTWP AIWMLASGNE YGNKGWPDNG EIDIMEHVGF DQDRLHGNIH
TKAFNHAIKS NKGNNIVVKG LSEDFHVYTC EWTPEAITIL VDGNAYFTFK KEASYQWAEW
PFDKPFHLIL NIAVGGNWGG QKGVDDSIFP QKMKVDYVRV YPLVTK
|
|---|
| |