Gene Dfer_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4927 
Symbol 
ID8228533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5953082 
End bp5953336 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content48% 
IMG OID644932775 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003089292 
Protein GI255038671 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.354289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.425395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACC AGGTCGTTAT GTGGGTCGGT ATCATCGGCG TATTTTACTT TTTCATGATC 
CGTCCGCAGC AAAAAAAGCA GAAGGAACAG AAAGAGCTGC TCAATAACCT GAAAAAGGGC
GATCAGGTGG TGACGATCGG TGGTATCCAC GCGCGGATCT ACACGGTGGA AGAAGCTACG
GTTACCCTTG AGTTGGATAA AGGTGTAAAG CTGACGGTCG AGAAATCGGC TATTTCACGC
ACTATCGCCG GGTAA
 
Protein sequence
MIYQVVMWVG IIGVFYFFMI RPQQKKQKEQ KELLNNLKKG DQVVTIGGIH ARIYTVEEAT 
VTLELDKGVK LTVEKSAISR TIAG