Gene Dfer_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4920 
Symbol 
ID8228526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5947491 
End bp5948258 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID644932769 
Productputative phage repressor 
Protein accessionYP_003089286 
Protein GI255038665 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0540753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGG CTATTGATGA AGAATTCAGG CGTTTTAAAC AGATTCGCGA AGAGCTGAAC 
CTGACCCAGG CCGCCTTTGC GGACGAACTC GGGATCAGCG CAACGACGGC CGATATCGAG
CGCGGGCGTA CGCGCATACC CGGGCAGGTT GTGAAGGAGC TTTTGCGTAA ATACCATATT
AATCCGCTCT GGCTGTTCGG CGACAGTCCG CAGAAATATC TGCATGCCGA CAAAATGTAT
GTAAATCCCA AAGTGGTGAC GGTGGACCAG GCCGGAAAGG ATAATATCGT GCTGGTGAGT
GCAAAAGCAG CCGCGGGTTA TCCGAATAAT ATCGGCGATG CGCAGTGGTT TGAGGCCCTG
CCGGCTTTCA CCATCCCGCT GCCCGAATAC CGCAATGCGA CATTCCGCGG TTTCCAGGTG
GACGGCGACA GTATGACGCC CGCATTACAG TCCGGCGAAT GGATCTGGGC CCGCGCGGTG
GATGATTGGG ACACGCTGAG TGACAAGCAC ATGTACGTGA TCGTGACCGT GGACAGTGTG
CTGGTTAAAA AGCTTCGCAA GGAAAAGGAT TCGGCTTTTG TCAATCTGAT TTCCCTGAAT
CCCGACTACG CACCGATCCG CGTCGACCGC AACGAGATCC GCGAAATATG GCAGGTCAAC
AGCAAACTGT CATTCGACCT GGAAGAAGAC CGCACCGAGA TAAGCCTCCA AAGCCTGCAC
CAGGAAATGC GCGAGCTGCG GCAGGAGGTG AAGCGGCTGG TTAAGTAA
 
Protein sequence
MLMAIDEEFR RFKQIREELN LTQAAFADEL GISATTADIE RGRTRIPGQV VKELLRKYHI 
NPLWLFGDSP QKYLHADKMY VNPKVVTVDQ AGKDNIVLVS AKAAAGYPNN IGDAQWFEAL
PAFTIPLPEY RNATFRGFQV DGDSMTPALQ SGEWIWARAV DDWDTLSDKH MYVIVTVDSV
LVKKLRKEKD SAFVNLISLN PDYAPIRVDR NEIREIWQVN SKLSFDLEED RTEISLQSLH
QEMRELRQEV KRLVK