| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4916 |
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| Symbol | |
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| ID | 8228522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5942496 |
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| End bp | 5945465 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932765 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003089282 |
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| Protein GI | 255038661 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0948833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACTCA ACTGCCACTC TTATTTCAGC CTGCGCTTCG GGACTATTCC TGAGGATGAA
CTTCTTGCGA TGTGCAGGGA GAACGGCTAT GACTGTGTTG CGCTGACGGA TATTAACAAC
ACGTCGGGGT GCCTGAACTT CGTCCGCATG GCGCCCAGGT TCGATATCAA GCCTATTGTC
GGGATCGATT TCCGGAATGG CGTCACACAG CAGTTTGTAG CGCTGGCGAA GAACAATGCG
GGTTTTCAGG TGCTGAACGC CTATTTATCG GCCCAGAAAC TGGCCGGCTT GCCGTTTCCC
GATCGCGCAC CGGAAATGGA GCACGTAGCG GTGATTTACC CGTTTGAAAA ACTGAACAAG
GAGCGCCGGG AACAGTTCGG GCCGAACGAG TACATCGGGA TTTCAATGCA GGAACTGGAC
AAACTGCATT ACTCACCGCT CCACCGTTTC AGGGACAGGC TTGTGATCCG GCAGCCGGTC
ACGTTTCGGA ATAAAAAGGA TTTCAATGCA CACCGGTTGC TCCGCGCGAT CGATGAGAAC
ACGCTTTTGA GCAAGCTGGC GGCTTCCGAA ACGGGCAACG AAAGCGAACA GATCGTGCAG
GCGAAGGTTT TAGAATACCA CTTTAAACAA AAAGATTTTC GCATCATCCT GGAAAACACC
CGCAAGCTGA TGGACGAGTG CGAGATCCGC TTCACTTTCG GAAATGAGCG TGAGCACCAA
AACCTGAAAA TATTCGGCAA GAACGAGGAA GAAGATTTTA AGAAACTAAG GTCGATGACT
TACCAGGCGC TCGGCTACCG GTATGGCGAT AATATCACCG ACGAAATTTT CGACCGGATC
GCCAAAGAAC TGGACATGAT CCGGCAGCAG AACTTCGTGC CGTTTTTCCT GGTAAACCAC
GATATCGTCA GCTATGCGCG CCGGAAAGGC TATTATTATG TAGGCCGGGG CAGCGGGGCC
AACAGCATTA TCGCCTATTT ACTCAACATC ACGAACGTAG ACCCCATCGA GCTGGATTTG
TATTTCGAAC GGTTCATCAA TCTCCACCGA AAGAATCCGC CCGATTTCGA CATTGATTTC
TCGTGGCGCG ACCGCGAGGA TGTGACCCGC TATATATTTG ACACCTACGG GAAAAACGGA
CAGGCGGCAT TGCTGGCCAC ATACAGTACT TTTCAGCACA ATTCCGCCGT GCGCGAACTC
GGAAAGGTGT TCGGGTTGCC CGCTTATGAG ATCGACGCTT TGAGCAATGG CAAGTACGAC
CCCAAAAAGC TCGACCAGCT TTCGGGGCTG GTGATCCGAT ATGCCGATTA CCTGCAAGCC
AATAACCAGC CCAACCACCT CAGCATCCAC GCCGGCGGCA TCCTGATTTC TCAACGGCCG
ATGCATTACT TTACGGCCAC CGACGTTCCG CCGAAAGGCT TCCCCACTAC GCAGTTCGAC
ATGGTGATCG CCGAGGATGT GGGGCTGAAC AAGTATGATA TTTTAGGGCA GCGAGGCCTC
GCGAAAATCA AGGAAACCCT TGAAATTATC CGTTACAATC GCCCCGAAGC CCCCGATTTC
GACATTAACG ACGTACGAAA ATTTAAAACC GACCCGAAGA TCAACGACCT GATCCGGCAG
GCGCAATGCA TTGGCTGCTT TTACGTGGAA TCGCCGGCGA TGCGGATGCT CCTGAAAAAG
CTGGAAGTGG ACAATTACCT GGGATTGGTG GCGGCGAGCT CCATTATCCG GCCTGGCGTA
GCCAAAAGCG GGATGATGCG CGAGTACATT TTGCGACACC GCCATCCCGA AAAGCGCAGC
GAGGCACACC CGCGCCTGCT CGAACTCATG GAGGAAACCT ACGGCATTAT GGTGTATCAG
GAGGACGTTA TCAAGGTCGC GCATTACTTC GCCGGCCTCA CGCTGGGCGA AGCCGACGTG
ATCCGCCGGG GCATGAGCGG CAAGTTCCGT GGCCGCGAGG AGTTTGAACG GGTGAAGAAG
AAGTATTTCA AAAACTGTCG CAGCAAAGGG TACGACGAGG CCATGACGAT GGACGTCTGG
AACCAGATCG CAAGCTTTGC CGGGTTCGCA TTCGCCAAGG GGCATTCCGC GTCCTATGCC
GTGGAAAGCT ACCAAACCTT ATTTTTAAAA ACCTATTTCC CGTTGGAATT CATGGTGGCG
GTGCTTAATA ATGGCGGCGG TTTTTACGCG CCCGAGCTGT ATATTCACGA AGCACGCATG
CTGGGGGCGC ATGTGCACGC GCCCTGCGTG AACCACAGCG AAGCGCACGC TACCATCGAA
GGCGACCAGA TTTACCTCGG CATGCAGTTC CTGAACGACC TCGAAGCGAA AACGATCGAC
AGGATACTCG CCGCTCGCGG GCAGGACGGC GCATTTACCT CATTGAACGA CTTCCTCGAC
CGCGTGCCGA TTTCGATCGA GCAGCTCACG ATCCTGATCC GTATTGACGC ATTCCGGTTT
ACGGGCGTCG ACAAGAAAAC GCTGCTTTGG AAAGCGCATT TCCGGCTGAG TACTACGCCG
ACGAAAGCGC CCCAAAAGCA GTTGTTCCAG GCTGAGGTCA GGGATTTTAA GTTACCGGAG
TTCCATTCAT CCATCCTCGA CGACGCTTAC GACCAGGTTG AATTGCTGGG CTTCCCGCTT
TGCAGCCCAT TCAATTTGTT GAAAAATCCG CTTCCAAAGA GCATTATGGC CAATGACCTG
CATAATTATG TAAACCAGGA AGTGGTACAA TACGGCTATC TGGTGGCGCT CAAAAACACC
CGTACCGCCC GCGGCGAATC GATGCAGTTT GGTACTTTCC TGGATTATGA AGGGCATTTT
ATCGATACAG TTCATTTCCC TACGGCCGCG GCCAAAGTGA ATGGTTCTGT AAAAGGCGTT
TACAAAATCC GCGGTGTGGT GACGGAAGAG TTCGGCTTTC TGACGGTGGA AGTGATGGAA
ATCACACGCA TGGAATCAGC TGAACGCTGA
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| Protein sequence | MLLNCHSYFS LRFGTIPEDE LLAMCRENGY DCVALTDINN TSGCLNFVRM APRFDIKPIV
GIDFRNGVTQ QFVALAKNNA GFQVLNAYLS AQKLAGLPFP DRAPEMEHVA VIYPFEKLNK
ERREQFGPNE YIGISMQELD KLHYSPLHRF RDRLVIRQPV TFRNKKDFNA HRLLRAIDEN
TLLSKLAASE TGNESEQIVQ AKVLEYHFKQ KDFRIILENT RKLMDECEIR FTFGNEREHQ
NLKIFGKNEE EDFKKLRSMT YQALGYRYGD NITDEIFDRI AKELDMIRQQ NFVPFFLVNH
DIVSYARRKG YYYVGRGSGA NSIIAYLLNI TNVDPIELDL YFERFINLHR KNPPDFDIDF
SWRDREDVTR YIFDTYGKNG QAALLATYST FQHNSAVREL GKVFGLPAYE IDALSNGKYD
PKKLDQLSGL VIRYADYLQA NNQPNHLSIH AGGILISQRP MHYFTATDVP PKGFPTTQFD
MVIAEDVGLN KYDILGQRGL AKIKETLEII RYNRPEAPDF DINDVRKFKT DPKINDLIRQ
AQCIGCFYVE SPAMRMLLKK LEVDNYLGLV AASSIIRPGV AKSGMMREYI LRHRHPEKRS
EAHPRLLELM EETYGIMVYQ EDVIKVAHYF AGLTLGEADV IRRGMSGKFR GREEFERVKK
KYFKNCRSKG YDEAMTMDVW NQIASFAGFA FAKGHSASYA VESYQTLFLK TYFPLEFMVA
VLNNGGGFYA PELYIHEARM LGAHVHAPCV NHSEAHATIE GDQIYLGMQF LNDLEAKTID
RILAARGQDG AFTSLNDFLD RVPISIEQLT ILIRIDAFRF TGVDKKTLLW KAHFRLSTTP
TKAPQKQLFQ AEVRDFKLPE FHSSILDDAY DQVELLGFPL CSPFNLLKNP LPKSIMANDL
HNYVNQEVVQ YGYLVALKNT RTARGESMQF GTFLDYEGHF IDTVHFPTAA AKVNGSVKGV
YKIRGVVTEE FGFLTVEVME ITRMESAER
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