| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4904 |
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| Symbol | |
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| ID | 8228510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5927336 |
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| End bp | 5927734 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644932753 |
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| Product | Nucleotide binding protein PINc |
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| Protein accession | YP_003089270 |
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| Protein GI | 255038649 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.202303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0310303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTG TTGTCGATAC AAATTGTTTA AGAGCTTCAA TTCCTCCTCA GAGCAAGTAT
TATCAGCTAT ATCTTGAATT TCACGCTGAA AAATTTGATT GGTACGTCAG CAATGAAATT
TTGCTGGAAT ATGAAGAAAT TCTGACACGG ACCTTCTCGA TCAGGACGGC ACAGACGGTA
CTCTACCAGC TGAGTTTGGC GCCGAATACA GTACATGCCG AACCGGCGTT TCGATGGAAT
CTTGTAGCAG ATCCCGACGA CAACAAATTT TCTGACCTTG CTATCAGCTG CAATTGTGAT
TACCTGGTAA CTAACGACAG AGGGTTCGAT GTTTTTAAGT CATTAGACTT CCCCAAACTG
AAAATTATCG CCTTGTCAGC TTTCCTTCAA TTATTTTAA
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| Protein sequence | MKIVVDTNCL RASIPPQSKY YQLYLEFHAE KFDWYVSNEI LLEYEEILTR TFSIRTAQTV
LYQLSLAPNT VHAEPAFRWN LVADPDDNKF SDLAISCNCD YLVTNDRGFD VFKSLDFPKL
KIIALSAFLQ LF
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