| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4837 |
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| Symbol | |
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| ID | 8228443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5845407 |
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| End bp | 5846654 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932686 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003089203 |
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| Protein GI | 255038582 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAG TTAAACCCAA GAAATTCTGG AATACCAAAC GCATCAGCAT GATCGGTGGC
GGTGTTTTGC TGGCCGCTTT CCTGGTCTAT CAGTTCTTTT TTGCCGATAC GAGAAGCAAA
CTGAACGTGG AGCAGGACAA ACTGACCATT TCGGAAGTGA GACAAGGTAA ATTCGACGAA
TTCATCGTCG TGACCGGCGT AGTGCAACCC CTGAAAACGA TCCAGCTCGA CGCGATCGTG
GGTGGCTATG TGACGGAAAA ACTCATCGAA GGCGGCAACA TGGTGAAACA GGGCGACGTG
CTCCTGCGGT TGGAAAACCA GAACCTGAAA TTGAGCTTTC TCCAATCGGA AACCGAGGCC
AGCCGCCTGG TAAACGATCT TCAAAATACA CGTCAGAACC TGAAAGTGGC GCGTTTTACA
CTCCAAAAGA CATTGAGCGA CCTGGATTTC CAGCTAGACC AGGCCAAAGA CGCACATGAC
CGCAACGTAA AACTTTTCAA GGACAAGGTC ATTCCCGAAG CCGATTATCT GAAAACGAAG
CGCGATTACG AAAAACTGGT AAGACAGCGT GAAATCGAGA TCGAATCGCA GAAATACCAG
GAAGAAAATG CTAAAATGCA GATTACACAA CTGGAAGGCA CATTGGCCAG CACGCAGAAA
AACGTGGGAC TCTGGCGCCA GACGCTCGAC AACCTGGTGG TGAAAGCGCC GGTATCCGGC
CTGTTGTCAT CCATGAATGT GGAAGTAGGA TCGAATATCA ACCAAGGGCA GAATATCGGG
CAGATCGACG ATTTGAACGG TTTCAAAATG CGCGTCAGCG TGGATGAGCA TTATATTTCA
CGGATTTTTG TGGGTCTGCA AGGCTCGATG GAGTTCAATG GAAAGGATTA CGGCCTGAAA
ATCATCAAAA TTTATCCTGA GGTGCTCAGC GGCCGGTTTG AAGTGGATAT GCAGTTCGAT
AAGGGCGCGC CGGAGCTGAT CAAACGCGGG CAGTCTGCCC CGATCCGCCT GCAACTCGGT
CAGCCTTCGC AGGCGACGTT GCTGCCGGTG GGTGGTTTCT TCTCCGAAAC GGGTGGAAAC
TGGGTGTACG TGGTGGGTGA CGATGGCAAG CGCGCCTCGA AACGCAACAT TACCCTCGGT
CGCAAAAACC CTGAATATTT CGAAGTCCTC GAAGGCTTGA AGCCTGGCGA GAAGGTGATT
ACCAGCTCGT ATGAGAACTT TGGAGACAAT GAAGTGTTGG AATTTTAG
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| Protein sequence | MDRVKPKKFW NTKRISMIGG GVLLAAFLVY QFFFADTRSK LNVEQDKLTI SEVRQGKFDE
FIVVTGVVQP LKTIQLDAIV GGYVTEKLIE GGNMVKQGDV LLRLENQNLK LSFLQSETEA
SRLVNDLQNT RQNLKVARFT LQKTLSDLDF QLDQAKDAHD RNVKLFKDKV IPEADYLKTK
RDYEKLVRQR EIEIESQKYQ EENAKMQITQ LEGTLASTQK NVGLWRQTLD NLVVKAPVSG
LLSSMNVEVG SNINQGQNIG QIDDLNGFKM RVSVDEHYIS RIFVGLQGSM EFNGKDYGLK
IIKIYPEVLS GRFEVDMQFD KGAPELIKRG QSAPIRLQLG QPSQATLLPV GGFFSETGGN
WVYVVGDDGK RASKRNITLG RKNPEYFEVL EGLKPGEKVI TSSYENFGDN EVLEF
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