| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4820 |
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| Symbol | |
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| ID | 8228426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5826057 |
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| End bp | 5826791 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644932669 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003089186 |
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| Protein GI | 255038565 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.334432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATTC TAATCGTTGA GGACGACTTT ATCATTGCGA AACATCTCCA ATTCTTGCTC
AATGGCTTTG GCTATGAAGC CAACGATATC GCAACGGACT ATACGACAGC CACAGAGATT
CTCAACAGCA AGGTATTCCA CCTGGCCGTC CTGGATATTA ATCTGAACGG TTATCAAACG
GGCATCGACC TGGCGGACTA CATCCGGGAA AACGTCAAGA TACCTTTCCT GTTCCTGTCC
GCGCACGAGG ATATCGCCGT TGTAAATGCT GCATTACAAG CCGCGCCGCA CGCCTTTTTG
CAAAAACCTT TTCAGAAAAT CACCGTTTAC ACGGCTGTAA AACTAGCGTT GAAAAATTAC
CGCCTGGCAG CGCTTGCGGG TGAAACTACT TCGGAAGAGA AAGAAGACAC GACGGTGATC
ACGGACGCTT TGTTCATCAA GGAAAAGCAC ATGTTCACCA AGATCATGCT TACTGACATC
CTGTATATCC GCAGCGACGA TAACTACCTC GAGTTACATA CTACCAAGAA GAAATACACC
ATCCGCGAGA CGCTGAAAAA CATGCTTCAG CAACTTCCCA CCAACTACTT CTTCCGCGTA
CATAAATCGT TCATTATCAA CCTGAATGCC ATTACAGCCA TTGATTATGT GCATGTAATG
ATCAACGATA TTGAAATCCC CATCACGAAC GATAACCGGA CGGAGCTCCT GAGCCGCATT
AAAACTTTTT CGTAA
|
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| Protein sequence | MNILIVEDDF IIAKHLQFLL NGFGYEANDI ATDYTTATEI LNSKVFHLAV LDINLNGYQT
GIDLADYIRE NVKIPFLFLS AHEDIAVVNA ALQAAPHAFL QKPFQKITVY TAVKLALKNY
RLAALAGETT SEEKEDTTVI TDALFIKEKH MFTKIMLTDI LYIRSDDNYL ELHTTKKKYT
IRETLKNMLQ QLPTNYFFRV HKSFIINLNA ITAIDYVHVM INDIEIPITN DNRTELLSRI
KTFS
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