| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4817 |
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| Symbol | |
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| ID | 8228423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5822131 |
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| End bp | 5823201 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932666 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_003089183 |
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| Protein GI | 255038562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.211256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC AGAGCACAGA GTTTCTTTAT AAGTACCTGA ACAATGCGTC TCCTACCGGC
TTCGAGTCGA CCGGTCAGCA GATATGGCTC GACTATATCA AGCCATATAT CGAAGAACAG
ATTATCGATG TATACGGAAC GGCCGTAGGC GTGATCGGCC CCGGCCAGGA CTACAAGGTG
GTGATCGAAG CCCATTCCGA TGAGATTTCG TGGTTTGTGA ACTACATTTC CGAAGACGGC
TACATCCACG TGCGCCGCAA TGGCGGTTCC GACGCGGCCA TTGCCCCATC CATGCGCGTA
AACCTGCACA CGGCCAAAGG CGTGGTGAAA GGGGTTTTCG GCTGGCCGGC GATCCACGTG
CGCGAAGTGG CCAAGGACCA GGTCCCCAAA GTGCACGAGC TGTTCATCGA TGTGGGTGCT
GCCAAAAAGG ATGAGGTGCT TGAAATGGGC ATTCACGTAG GTACCGTGGT CACTTTCGCG
GACGGGCTGG ATGAACTCAA CGATAAATAT TACCTGGGCC GCGCGCTCGA CAACCGCATG
GGCGGTTATA TGATCGCCGA AGTGGCGCGC ATGCTGCACG AAAACAATGT GAAGTTGCCG
TTTACCTTAT ATGTGGTGAA TGCGGTGCAG GAAGAAATCG GCCTCCGCGG TGCGGAAATG
ATCTCCCGCC GCTTGAAACC CGACCTGGCG ATTTGTACTG ACGTGACGCA CGACACACAG
TCGCCGATGT ACAATAAAAA GGAGCAAGGT GACCTGAAAT GCGGCAGCGG CCCGGTGATC
TGCTACGGCC CGGCGGTACA GAACAATGTC CGCGACCTGC TGATCCGCGT GGCGGAGGAG
AAAAAGATCC CGTTCCAGCG TCAGGCGGTG AGCCGCTCCA CCGGCACGGA TACGGACTCA
TTTGCCTACT CCACAGAAGG TGTCGCATCC GCATTGATCT CATTACCATT GAAATACATG
CACACCACCG TGGAAATGGT TGCCAAAGAG GACGTGCAGA ACGTAATACA ACTGATGTAC
GACGTACTGC TTTCGCTGAA AGGCGGGGAG GATTTTCGTT ACATTAAATA A
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| Protein sequence | MSDQSTEFLY KYLNNASPTG FESTGQQIWL DYIKPYIEEQ IIDVYGTAVG VIGPGQDYKV
VIEAHSDEIS WFVNYISEDG YIHVRRNGGS DAAIAPSMRV NLHTAKGVVK GVFGWPAIHV
REVAKDQVPK VHELFIDVGA AKKDEVLEMG IHVGTVVTFA DGLDELNDKY YLGRALDNRM
GGYMIAEVAR MLHENNVKLP FTLYVVNAVQ EEIGLRGAEM ISRRLKPDLA ICTDVTHDTQ
SPMYNKKEQG DLKCGSGPVI CYGPAVQNNV RDLLIRVAEE KKIPFQRQAV SRSTGTDTDS
FAYSTEGVAS ALISLPLKYM HTTVEMVAKE DVQNVIQLMY DVLLSLKGGE DFRYIK
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