| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4813 |
|---|
| Symbol | |
|---|
| ID | 8228419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5819506 |
|---|
| End bp | 5819967 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644932662 |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_003089179 |
|---|
| Protein GI | 255038558 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.259352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA TGTATTCGCA GGTTCACCTA CATTTCATTT TTGCGCCAAA ATACCGGCAA
GCCCTGATCA GACCGGATTG GGAAATCGGA TTGTACAAAT ACATAACGGG CATCGTAGAG
GCCCGTAAGC ACAAAATGAT CGCTATCAAT GGCATGAGCG ATCATTTGCA CATGCTCGTT
GGATTCCGCA CCCACCAGTC GATCGCAGAT TTGATGCAGG ATGTCAAAGC GGATTCATCG
CAATGGATCA ACGTAAATCG GTTTTGTGCA AGCCGGTTCG AATGGCAATC GGGATATGGG
GTGTTTTCTT ATTCCAAATC ACAAGTTCCC GACGTTATCC GTTACATTCA AACACAGAAA
GAACATCATC GAAAAATGAC GTTTCAGGAA GAGTATCAGG CATTTTTGGA AAAGTTTGAA
GTGAAGTTTG ATGAGCGGTA TGTTTTCAAA ATGCCGGAAT AA
|
|---|
| Protein sequence | MANMYSQVHL HFIFAPKYRQ ALIRPDWEIG LYKYITGIVE ARKHKMIAIN GMSDHLHMLV
GFRTHQSIAD LMQDVKADSS QWINVNRFCA SRFEWQSGYG VFSYSKSQVP DVIRYIQTQK
EHHRKMTFQE EYQAFLEKFE VKFDERYVFK MPE
|
|---|
| |