| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4805 |
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| Symbol | |
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| ID | 8228411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5808011 |
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| End bp | 5810386 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932654 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003089171 |
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| Protein GI | 255038550 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0410465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0531231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT TTTATATTTT AATCCTAGTC CTGCTGACGA GCGTGTCCGC ATTCGCGCAA
AACGGCAGAA TATCAGGACA GATACTGAGC TCGGATGGGC AACCGGCAGA GCAGGTTTCG
GTGGGAATTA AAGGAACCGC TCGTGGTGCG ATCTCCGACA ATCAAGGAAA ATTCACAATT
GAAAGGGTAA AACCTGGCAC CTACACTCTA CTCGTAAGCT TTGTAGGCGT GGCCACGCAG
GAGAAGGAAG TTTCTGTCGC TGCGGGCGAA ACGGTGAACG TTTCCTTCAC ACTCTCCGAA
AATGCGAACG AATTGCAGGA AGTGATCGTA AAGAGCGGTA CCAGCTACAA ATCGGACCAG
TTTTCATCCA GCATGAAACT CCTCACACCC ATTCTGGAAA CTCCTCAGAA CGTACAGGTT
GTAACATCCA AAGTACTCGC CGACCAGCAG ATCATCAGCA TGAGCGACGG ACTGATTCGC
AACGTGAGCG GCGCCGTTCG TCTGGAACAC TGGGGCGATA TGTATGCCAA TATCAGCATG
CGCGGCTCGC AAATCCAGGC TTTCCGCAAC GGTTTCAATG TGGTAAACTC CTACTGGGGC
CCGCTGACAG AAGATATGAG CTTCGTGGAC CATATTGAAT TCGTGAAAGG CCCGGCAGGT
TTTATGCTGG CCAACGGCGA TCCGAGCGGA TTGTATAACG TGGTTACCAA AAAGCCGACC
GGCCAGGATA AAGGTGAGGT GGCATTCAGT GTGGGCAGCT TCGGCCTATA CCGCGCCACC
CTCGACCTCG ACGGCAAACT GAGCAAGGAT AGCAAATTCC TTTACCGCCT CAATGTGGCG
GCACAGAACA AAGGCTCTTT CCGCCCCTTT GAATACAACA ACCGTTACAG CATCGCGCCG
GTGGTGTCTT ACCAAATCGA CGAAAAGACC AAACTGACGG CCGAATACAC ATTGCAATAC
GCGAAAATGT CGAACGTAGG GTCGTTCTAC GTGTTCTCGC CGGATGGCTA CGCCACATTG
CCGCGTGATT TCACCACGAT GCCTCAGGGC CTGGCTCCTA CCAAGATCAA CGACCACAGT
GTGTTCGTGA ACTTGCAGCA CCAGATTAAT TCAGACTGGA AATTGACTGC GCAAGTGGGT
TATTTCAATT ACCAACTGGC AGGCAGCAGC ATGTGGCCGG ATTCTATCAA ACCGAGCGGA
CTAATGTACC GCGGCGTAGG CCTTTGGGAT GCAAAAAGTG AAATGACGCT TGGCCAGGTG
TTTGTTAACG GTGACGTGAA AACCGGCGCT GTGCGGCACC GCATTCTCGG CGGAATCGAT
CTGGGTAGCA AAAACTACTT CGCCGACTGG TCGCAATCCT ACGCGCTGGA CTCAGCCGGT
GCCGAATTTG ATCCGAAAAA TCCTTACTAC GGCACGCCGG TAATGGGTTT CCCGGTATTT
GATCGCGCTA TGAACCTCGA ATCCCGTGCA GCGGCAGGCG GCGGCTTGCA GAACCAGGAT
TATACAGGCC TATACCTGCA AGACGAACTC GGCTTCCTGG ATAACCGTAT CCGTCTGACA
TTGGCTGGTC GGTATACCTA CGTGAAACAA TCGGCATACG GAGGCCCGAA CGACGAGGCC
AAACATTTCA CGCCGCGCGT TGGATTGAGC GTTTCGCTGA CTAAAAACAC TTCATTATAT
GCATTGTACG ACCAGGCATT CATCCCCCAA TCGGGCCGTT TGAAGAACGG TGGTTCCGTA
AAACCCATCA CGGGTAACAA CACCGAGTTT GGTGTGAAAC GCGACTGGGC GGAAGGCCGC
TGGAATACAA CGCTGGCATT CTACCGGATT TTGAAAAATA ATGAGCTCAC AGGCGATCCT
GAGAGCCAAG CGTCTGGGCT GAGCATTGTG CTGGGCCAGA AAAGGGCCCA GGGTGTGGAA
TTCGACCTTC GCGGTACGAT CATTAATGGC CTGAACCTTA CTGCTAACTA TGCCTACACC
ATCGCCGAAG TGACGAAGCT TGCCGAAGGT ATCACAGACA TGAAAGTGGG CGACCTGGTT
CCGGGTTATG CCAAACATAC TACCAATGCA TGGCTGAGCT ATAAAGTGCA GCACGGTTCG
TTGAAAAACG CCGGTATTTC CGCAGGTTTC ACATACCTCG CCGGCCGCGC CACCACCAAC
TGGTCGACCA CGAACACTGC CCTCAACCAA CCCGATTATT TCAAACTGGA CGGTGGGGTT
TTCTGGGAGA AAAACAATAT CCGCCTCACT GCGAACGTGT TCAACATCCT GGACAAATAC
CTGTATAGCG GCGGTTACTA CGATTGGTTG AAAGCCTACT ACTGGCAGGC AGATCCTCCG
AGAAACTATC GTTTGAGCGT TACCTATAAG TTTTAA
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| Protein sequence | MKNFYILILV LLTSVSAFAQ NGRISGQILS SDGQPAEQVS VGIKGTARGA ISDNQGKFTI
ERVKPGTYTL LVSFVGVATQ EKEVSVAAGE TVNVSFTLSE NANELQEVIV KSGTSYKSDQ
FSSSMKLLTP ILETPQNVQV VTSKVLADQQ IISMSDGLIR NVSGAVRLEH WGDMYANISM
RGSQIQAFRN GFNVVNSYWG PLTEDMSFVD HIEFVKGPAG FMLANGDPSG LYNVVTKKPT
GQDKGEVAFS VGSFGLYRAT LDLDGKLSKD SKFLYRLNVA AQNKGSFRPF EYNNRYSIAP
VVSYQIDEKT KLTAEYTLQY AKMSNVGSFY VFSPDGYATL PRDFTTMPQG LAPTKINDHS
VFVNLQHQIN SDWKLTAQVG YFNYQLAGSS MWPDSIKPSG LMYRGVGLWD AKSEMTLGQV
FVNGDVKTGA VRHRILGGID LGSKNYFADW SQSYALDSAG AEFDPKNPYY GTPVMGFPVF
DRAMNLESRA AAGGGLQNQD YTGLYLQDEL GFLDNRIRLT LAGRYTYVKQ SAYGGPNDEA
KHFTPRVGLS VSLTKNTSLY ALYDQAFIPQ SGRLKNGGSV KPITGNNTEF GVKRDWAEGR
WNTTLAFYRI LKNNELTGDP ESQASGLSIV LGQKRAQGVE FDLRGTIING LNLTANYAYT
IAEVTKLAEG ITDMKVGDLV PGYAKHTTNA WLSYKVQHGS LKNAGISAGF TYLAGRATTN
WSTTNTALNQ PDYFKLDGGV FWEKNNIRLT ANVFNILDKY LYSGGYYDWL KAYYWQADPP
RNYRLSVTYK F
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