| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4780 |
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| Symbol | |
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| ID | 8228386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5779682 |
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| End bp | 5780269 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932629 |
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| Product | siroheme synthase |
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| Protein accession | YP_003089146 |
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| Protein GI | 255038525 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000392652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00414073 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACAATC TCTTCCCGAT ATTCCTGAAA CTTGAAAACC TGCACACGCT CATTGTAGGC
GGCGGCTACG TAGGTTTGGA AAAAATCACT GCTGTGCTGG ACAATGCACC GCTCGCCCTG
GTCACGCTCG TGGCGCCTGA AATCCGTGAG GAAATCAGGG ACATCGCTGC GGCCAATTCT
CGAATAAATC TAATTGTGCG AAGGTTTGAA GACGACGATT TGCTGGAAAA AGACCTGGTG
ATCGTCGCCA CGAACGACAA ACCGGAAAAC AAGCGTATCT GGGAAACCGC ACGTGCCCGG
CACATGCTCG CCAACGTAGC CGATACGCCC GATATCTGCG ATTTTTACCT CTCTTCGGTT
GTCAGAAAAG GGAATTTGAA GGTGGCTATT TCTACCAACG GAATGTCCCC GACCTTCGCG
AAACGCCTCA AAGAAGTGCT CGGCGAAGCG CTTCCCGACA ATCTCGATAC CGCCATGGAG
CAGCTCAAAG CGGTACGAGA TATGCTCAAA GGTGATTTTG CATCCAAAGT CGATGAATTA
AACCGGATTA CGTCGGTTTT GACGGAAAAG AAAAAAGATG CTTCGTAA
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| Protein sequence | MNNLFPIFLK LENLHTLIVG GGYVGLEKIT AVLDNAPLAL VTLVAPEIRE EIRDIAAANS
RINLIVRRFE DDDLLEKDLV IVATNDKPEN KRIWETARAR HMLANVADTP DICDFYLSSV
VRKGNLKVAI STNGMSPTFA KRLKEVLGEA LPDNLDTAME QLKAVRDMLK GDFASKVDEL
NRITSVLTEK KKDAS
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