Gene Dfer_4759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4759 
Symbol 
ID8228365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5754055 
End bp5755200 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content54% 
IMG OID644932608 
Productoxidoreductase domain protein 
Protein accessionYP_003089125 
Protein GI255038504 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.86109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0244054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC ATACCATTGG CATTATCATG AACGGCGTAA CCGGCCGTAT GGGAACCAAC 
CAGCATTTGC TGCGCTCTAT TAAAGCCATT ATCGAGCAAG GCGGCGTGAA AATTTCTTCC
GACGAGGTGA TCATGCCCGA CCCGATTCTC GTAGGACGCA ACGAAGCAAA ATTGCAGGCA
CTTTGCAAGC AATCGGGCGT GCAGAAGTAC ACAACGGACC TCGAATCGGT GATGTCCGAC
TCGCATTACC AGATCTATTT CGATGCGCAG GTGACCGGCC GCCGGGCTGC GGCTGTGAAG
AAGGCAATCG AAGCCGGAAA ACACATTTAT TGTGAAAAAC CGACCGGTAC TACTACCGAG
GAGGCATTGG AGCTTTATGA CCTCGCTACC AAAGCGGGCC TGAAAAACGG CGTGGTGCAG
GATAAGCTGT GGCTGCCGGG CTTGGTAAAA TTGAAAAGAC TGATGGAAGC CGGCTTCTTC
GGCAAGATCC TTTCCGTACG CGGCGAGTTT GGTTACTGGG TTTTTGAAGG AACCAGCATT
CCGGCACAGC GCCCATCATG GAACTACCGC AAAGAAGACG ATGGCGGTAT CATCGTAGAT
ATGCTCTGCC ACTGGCGTTA TGTGCTGGAT AACCTGTTTG GAAAAGTAAA GGCGGTATCC
TGCCTCGGCG CCACGCATAT TCCCGAGCGT GTGGACGAGA ATGGCAACAC CTATAAATGT
ACCGCCGACG ACGCCTGCTA CGCCACATTC GAGCTGGAAG GCGACGTGGT CGCGCATTTC
AACTCATCGT GGACGGTACG CGTGCGCCGC GACGACCTGC TTACGCTGCA AGTGGACGGC
ACGCACGGCT CGGCGGTGGC CGGTTTGCGC GATTGCTACG TTCAGCATTA CGGGAATACG
CCAAAGCCTG TCTGGAACCC CGACATTCCT CAGCCGATCC CATTCTTCGA TGGGTGGTCG
AAAGTGCCTG AACAGGAGAT TTACGACAAT GCGTTTAAGG CGCAATGGGA GCTTTTCCTG
AAACATATTG TGAAAGACGA ACCATTCCCA TGGGACCTGA AAGCGGGTGC TCGCGGTGTG
CAACTGGCCG AAAAAGGCCT CGAAAGCTGG GAGAAACGCC AATGGGTTGA CGTACAGGAA
CTATGA
 
Protein sequence
MTTHTIGIIM NGVTGRMGTN QHLLRSIKAI IEQGGVKISS DEVIMPDPIL VGRNEAKLQA 
LCKQSGVQKY TTDLESVMSD SHYQIYFDAQ VTGRRAAAVK KAIEAGKHIY CEKPTGTTTE
EALELYDLAT KAGLKNGVVQ DKLWLPGLVK LKRLMEAGFF GKILSVRGEF GYWVFEGTSI
PAQRPSWNYR KEDDGGIIVD MLCHWRYVLD NLFGKVKAVS CLGATHIPER VDENGNTYKC
TADDACYATF ELEGDVVAHF NSSWTVRVRR DDLLTLQVDG THGSAVAGLR DCYVQHYGNT
PKPVWNPDIP QPIPFFDGWS KVPEQEIYDN AFKAQWELFL KHIVKDEPFP WDLKAGARGV
QLAEKGLESW EKRQWVDVQE L