Gene Dfer_4745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4745 
Symbol 
ID8228351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5739873 
End bp5740892 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID644932594 
ProductThreonine aldolase 
Protein accessionYP_003089111 
Protein GI255038490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.285459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG ACCTGCGCAG CGACACCATC ACCAAACCTA CCCGGGAAAT GCAGGAAGCC 
ATGTGGGCGG CAGAAGTGGG CGATGATGTT TTCGGCGACG ATCCAACCGT GAATGCATTG
CAGCAAAAGG CGGCTCAGCT TTTCGGAATG GAGGATGCGC TTTTCTGCCC TTCCGGCACC
ATGACCAACC AGCTCGCTAT CCGCGTGCAC ACCCGGCCCG GAAGCGATGT GATCTGCGAT
AAGTATTCGC ACATTTATCT GTACGAAGGC GGGGGCATTA TGCTCAACGC GTTTTCATCG
GTAAAACTTC TCGACGGCGA TCGCGGAAGG CTGAGCGCAA GCCAGGTGAC GGAGGCGATC
AGTCCGGAAC ACGATGTGCA TTCTACGGTC ACGCGGCTCG TTTCGTTGGA AAACACGATG
AATAAGGGCG GCGGCTGCTA CTATGATTTC AGCGAGATAA GGGCGATCCG CGATGTTTGT
CGCGAGCGGA ACATCCCGCT GCATCTGGAC GGCGCCCGGC TTTTCAATGC ATTAGTCGAA
ACGGGCGAGA CGCCCGCACA ATACGGCGAA GCGTTCGATA GTATCAGCAT TTGCCTTTCC
AAAGGTCTGG GATGTCCCGT TGGGTCGTTG CTCATAGGAA CGCGTGCGCT GATCCGCGAA
GCACGGCGCT TCCGCAAGGT AATGGGTGGC GGCTGGCGCC AGGCTGGTTT TCTTGCAGCG
GCCGGCCTTT ACGCGCTCGA TCACCATGTA GGCCGCCTGA AAGAAGATCA TAGCCGCGCA
AGGTCCGTGG GCGAATGCTT TTCGGCGCGG GCGGAGGTTG CGGAAGTTTT TCCGGTGGAT
ACCAACATCG TGATCGTAAG GCTTCACGAC GACATTTCCG AAAAAGAATA CGTCAGCCGC
CTGGCCGATG CCGGAATACT GGCTGTCACT TTTGGAAAAG GGCTCGTCCG GTTTGTCACG
CATCTCGATT TTACCGACGA CCACCTCGAC ATCATGCGGA GCAAAGTGAG AAACCTTTAA
 
Protein sequence
MKIDLRSDTI TKPTREMQEA MWAAEVGDDV FGDDPTVNAL QQKAAQLFGM EDALFCPSGT 
MTNQLAIRVH TRPGSDVICD KYSHIYLYEG GGIMLNAFSS VKLLDGDRGR LSASQVTEAI
SPEHDVHSTV TRLVSLENTM NKGGGCYYDF SEIRAIRDVC RERNIPLHLD GARLFNALVE
TGETPAQYGE AFDSISICLS KGLGCPVGSL LIGTRALIRE ARRFRKVMGG GWRQAGFLAA
AGLYALDHHV GRLKEDHSRA RSVGECFSAR AEVAEVFPVD TNIVIVRLHD DISEKEYVSR
LADAGILAVT FGKGLVRFVT HLDFTDDHLD IMRSKVRNL