Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4740 |
Symbol | |
ID | 8228346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5734250 |
End bp | 5735008 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644932589 |
Product | Patatin |
Protein accession | YP_003089106 |
Protein GI | 255038485 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.236606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG CTCTTATCCT TTCAGGCGGG GGGGCTCGGG GGATTGCGCA TTTGGGGGTG GCGCAGGCTT TGCGTGAGCG GGGCGTGAGG CCGGATGTGA TCAGCGCTAC GAGTTCGGGG GCGTTTGTGG GGGCTTTGCT GGCTTATGGC TATGAGCCGG CGGATGTTTT GAAGATTATT CGTGAAACGA GTTTTTTCCC CTATTTCCGG TTTGCGATCG GGAAGAGCGG GTTGCTGCAT TTGAGGAAAA TGGAGGATGT TTTCTGCAAA TTCATCCCGG AAAACAGTTT TGAAATACTC CAAACACCGC TCGTGGTGAC TGCTACCGAC ATCGTCTCGG GCGAGGAGAT TCGCTTTCGC AGCGGTGAGC TGGCGCTGCC CGTACTGGCG TCGTGCTGCA TTCCCGGGCT TTTCAGTCCG ATGCATTACA ATGGCCACGA GCTTGTGGAC GGCGGGGTGT TGAACAACCT GCCCGTGGAA CCGGTGCTCG GCGAGGCGGA CTACCTCATT GGCAGCCATT GCAATCCGTT CGGCCTCGAC AGGCCTTTGC GGCGCACAAC CGAAATCGTG TACCGCAGCC TCATTCTCGC GATGCACACC AAAACCAAAT CCCGGTGCGC CCAATGCGAT TTACTCATTG AGCCACCGGT ATTAAGCCGT TTCAGTATTT TCGATTTCAG GAAGGCTGAT CAGCTTTTCG AGGCTGGTTA TACTTATACC GAAACCTTGC TTGAACAGCC CGGTACGTTA TTTCCCTGA
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Protein sequence | MKTALILSGG GARGIAHLGV AQALRERGVR PDVISATSSG AFVGALLAYG YEPADVLKII RETSFFPYFR FAIGKSGLLH LRKMEDVFCK FIPENSFEIL QTPLVVTATD IVSGEEIRFR SGELALPVLA SCCIPGLFSP MHYNGHELVD GGVLNNLPVE PVLGEADYLI GSHCNPFGLD RPLRRTTEIV YRSLILAMHT KTKSRCAQCD LLIEPPVLSR FSIFDFRKAD QLFEAGYTYT ETLLEQPGTL FP
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