| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4698 |
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| Symbol | |
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| ID | 8228304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5667189 |
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| End bp | 5670731 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932547 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003089064 |
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| Protein GI | 255038443 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.159588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAATT ACATTGCACT CCTGCTTGTC GGGCTCATCG CGCTGGCATG TGCAAAGAGT
AAAACTGGGG GGGCCTCCCG GGCGTCGTCT GAAAAAGCCG GCGCTTCCAA AGGCCGCAGG
GCCGAAGTAT TGTTCCTGGG ACATAACAGC AAGCACCACG ATTCGGGCAA GTACGCGCCG
TGGCTGTCGA TCAAGCTGTT CAAAAGCGGC ATTAACATGT CGTACACCAC CCAGCTGAAC
GATATTAATC CTGAAAACCT GGCGAAGTAT GACGGGCTGA TCATTTATGC CAACCACGAT
TCATTGTCGC CGTCGCAGGA GAGCGCTATG AAGGCATTCG TGGAAGGCGG CAAAGGACTT
ATCCCGATCC ATTCGGCCTC CGGTTGTTTC CGCAATTCTT CCTGGTATAT CAAAACCATC
GGCGGACAGT TTGCCTCCCA CAAAACAGGC TCATTTAAAA ATACTATTCT AAAACCGGAT
CACCAGGTCA TGAAAGGCAT TACCGACTTT CAGACCTGGG ATGAAACTTA CGTCCACAAA
AACCTGAACC CCGACAAGAC CGTCCTGGGC GAACGCGTGG AAGGCGACGT GCATGAGCCC
TACACCTGGG TGCGCAACGA GGGCAAAGGC CGCGTTTTCT ACACCGCCTA CGGCCATGAG
GACAGCACAT GGACGAACAA AGGCTTCCTC GACCTCGTGA GGAACGGCGT GTTATGGGCA
GTAGGAGACA AGGTACAAGC GCAAATCGCG GCATTGAACC TGCCCGACGT GGATATTTAC
AATTCCGATA CGATTTCGCA TTACACCAAA CGGCACGTGG TGCCTAAAAT GCAGGAATCG
CTATCACCGG CCGAATCCAA CAAGCTGACG CAGATCCCGC CGGATTTTGA AATACAACTT
TTTGCTTCGG AACCAGACAT TACCAATCCC ATTGCCATGT CGTGGGATGA GCGCGGGCGG
CTTTGGGTGG TCGAGTCCGT CGATTACCCA AACACATTCA CGGAAACCGA CGGCGCGGCC
AACGACCGGA TTAAGATTTG CGAGGATACC AATGGCGACG GCAAGGCCGA TAAGTTCACT
GTATTCGCCG ACAAGCTGAA CATCCCGACC AGCATGGTAT TTTCCAATGG TGGCGTGATC
GTGTCCATGG CGCCGGATTT CGTATTCCTG AAAGACACCA ATGGCGACGA CGTGGCCGAC
ACCCGCGAGG TGCTCATGAC CGGCTGGGGC AAAAACGATA CCCACGCCGG GCCGTCGAAT
TTGCAATATG GTTTTGACAA CAAAATATGG GGCGTGCTGG GCTTTTCGGC ATTCAACGGG
ACTATTAATG GTAAGAAAAT GAGCTTCTCG CAGGGGCTTT ATAATTTCAA ACCGGATGGT
AAAGAGTTTG AATACCTCGG CAGCAGCAGC AACAACACCT GGGGGCTGGG GTTCACAGAA
GATAACAACA TTTTCCTTTC GACGGCCAAC AACACCCACA GCGCATTCTT CTCCATGCCT
GGCAGGTTAA TGCAGCGCAC GCTCGGCGAA GAGCAGCCGT CGGTACAACC TATTCAAAAG
ATCGACGGGC ATTATGATGC GCACGCCTTG ACGCCGAATT TACGTCAGGT TGACGTGGTA
GGAGGGTTTA CTTCGGCGGC AGGCCACCAT TTTTACACCG CCCGAAACTA CCCGAAAGAA
TACTGGAACC GCGTCGCGTT CGTCACCGAA CCGACCATTC GTTTGGTACA CAAAGCGATC
CTCGAACCGG ACGGCGCGGG TTTTAAAGAA AAGGACGGCT GGAACTTCAT GGCCAGTTCG
GATGAATGGT TCGGTCCGGT GCAAGCCGAG GTTGGGCCGG ATGGTGCGGT ATGGGTGGCG
GATTGGTATA ACTTCATCAT CCAGCACAAT GTGTTTGTTC CGGCGCAGTC GCCTTCGAAA
TTCATCCTGC CGTTTGAAGA GCAGCCGCAC GGGCCGGGCA ATGCATTCAG CAGCCCAATG
CGCGATCTCA ACCACGGCCG TGTTTACCGC ATTGTGTATA AAAATGCTAA AAAAGCGCCT
GCATTAAAGC TCTCCAAAGA CGATCTGCCC GGACTGGTAG CCGCATTGGA AAACGATAAT
ATGTTTTGGC GGATGACCGC GCAGCGCCTG CTTGTGGAGT CGAAAAAGCT GTCTGTGTTG
CCGGATTTGT ACAAAATCAT CAACAATCCA AAAGTGGATG AAATTGGCTT GAATAGCCCC
GCTGTACACG CACTATGGAC GATGCACGGC CTGGGCGCAT TGGATGGTTC GAATGCAGAG
GCATTGCAGG TCGTGAGCAA AGCACTGACC CACCCGGCAG CCGGCGTGCG CAAAGCCGCA
GCGAGTGTGT TACCGAAGCA GGCGCAAAGT TTTGAAATAC TGGAAAAAGG CATAAAAGAT
GCGAATCTGA ACACCCGCCT GAGCGTGTTC GTAGCCATTG CCGACTTGCC AGCCTCGGAA
AAAGTAGGGG CAGCCATTTA CCAGGCCTCG CTGGACGAGC AGAATGCCAA AGATCCGTGG
CTGTCCCGCG CCATTCTCGC AGCGGCTATC CAGCACGAAA AAGGCTTCCT CGCCGCAGCC
GGCAAGCAAT CGCAGCCCTC CGCATTGACT GCGCAGGTTA CCGAAGCATT GAGCAGGGAA
ATTTATCCGC TGGGCAGAAG AAGCACGCTG CAATTCTCGC CGGATGTTTC CGGTAAAGAA
ATTACCATCC GCGCTTCCAT CACCAAGGGC CGCGACCGCG CATTGCAGGG CTTCATTGCG
GGCCAGGGCG GGAAAGATGG CGGATATGCA TTGTACATTC AGGATGGCAA GCTCGTCATG
GCCGTCAGGC AGCACGGAAT GCTGAGCAAG GCCGTTACAT CGGGCATTTT GCCGGATAAA
TTCGATGTGG TAGCAAGCCT GACGGAAGGC GGTAACATCC GCATAGATAT CGATGGAAAA
GAAGCCGCGA CCGGCAAGGC GCACATGCTT TTCAATGCGC CGCTCAGCAA CTCGGTACGC
TCCGGCGAGG ATATGGAAGG CGAGGACAGG ATTGGCGAGT ATGAAGGGCG GTTTGGATTT
GCAGGTAATT TTCAAAAAGC ATCCCTCGAA CTGAACCGTC CGAATGAAGG TGGTGGCAAT
GCGGTTTCTT CTGCCAAATC TGCTCCGAAA TCGGGCGCTT CCAATGCCAC GGTGATTGAG
CTGAAAGTAG AAAAGGAAAT TATGCAGTAT GACAAAAAGC TGATTACCGC GAAGGCCGGC
CAGAAAGTGG TGATCAACCT CGAAAACCCG GATGGCATGC AGCACAACCT TTTGATCATC
AAACCCGGCA CATTGCAGAA AGTAGGTAAG GCGGCCGACG AACTTTTGAC TAATCCGAAA
GCGGCTGAAA TGCAGTACGT TCCCAAGATA CCGGAAGTGT TGTTCGCCAC CAGACTCGTG
AGTACCGGTG AAACCGTGAC GCTGGAATTC ACCGTCCCCG CCGAGCCGGG CGATTACCCC
TACGTGTGCA CATTCCCCGG CCATTGGCGC GGTATGAATG GTATCCTGCG GGTAACAAAA
TGA
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| Protein sequence | MRNYIALLLV GLIALACAKS KTGGASRASS EKAGASKGRR AEVLFLGHNS KHHDSGKYAP
WLSIKLFKSG INMSYTTQLN DINPENLAKY DGLIIYANHD SLSPSQESAM KAFVEGGKGL
IPIHSASGCF RNSSWYIKTI GGQFASHKTG SFKNTILKPD HQVMKGITDF QTWDETYVHK
NLNPDKTVLG ERVEGDVHEP YTWVRNEGKG RVFYTAYGHE DSTWTNKGFL DLVRNGVLWA
VGDKVQAQIA ALNLPDVDIY NSDTISHYTK RHVVPKMQES LSPAESNKLT QIPPDFEIQL
FASEPDITNP IAMSWDERGR LWVVESVDYP NTFTETDGAA NDRIKICEDT NGDGKADKFT
VFADKLNIPT SMVFSNGGVI VSMAPDFVFL KDTNGDDVAD TREVLMTGWG KNDTHAGPSN
LQYGFDNKIW GVLGFSAFNG TINGKKMSFS QGLYNFKPDG KEFEYLGSSS NNTWGLGFTE
DNNIFLSTAN NTHSAFFSMP GRLMQRTLGE EQPSVQPIQK IDGHYDAHAL TPNLRQVDVV
GGFTSAAGHH FYTARNYPKE YWNRVAFVTE PTIRLVHKAI LEPDGAGFKE KDGWNFMASS
DEWFGPVQAE VGPDGAVWVA DWYNFIIQHN VFVPAQSPSK FILPFEEQPH GPGNAFSSPM
RDLNHGRVYR IVYKNAKKAP ALKLSKDDLP GLVAALENDN MFWRMTAQRL LVESKKLSVL
PDLYKIINNP KVDEIGLNSP AVHALWTMHG LGALDGSNAE ALQVVSKALT HPAAGVRKAA
ASVLPKQAQS FEILEKGIKD ANLNTRLSVF VAIADLPASE KVGAAIYQAS LDEQNAKDPW
LSRAILAAAI QHEKGFLAAA GKQSQPSALT AQVTEALSRE IYPLGRRSTL QFSPDVSGKE
ITIRASITKG RDRALQGFIA GQGGKDGGYA LYIQDGKLVM AVRQHGMLSK AVTSGILPDK
FDVVASLTEG GNIRIDIDGK EAATGKAHML FNAPLSNSVR SGEDMEGEDR IGEYEGRFGF
AGNFQKASLE LNRPNEGGGN AVSSAKSAPK SGASNATVIE LKVEKEIMQY DKKLITAKAG
QKVVINLENP DGMQHNLLII KPGTLQKVGK AADELLTNPK AAEMQYVPKI PEVLFATRLV
STGETVTLEF TVPAEPGDYP YVCTFPGHWR GMNGILRVTK
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