Gene Dfer_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4653 
Symbol 
ID8228259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5617619 
End bp5618473 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID644932502 
Producttranscription factor jumonji jmjC domain protein 
Protein accessionYP_003089019 
Protein GI255038398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.538116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG TGCCGATAGA AAAGCGCACC GGACTTACGC GCGAAGAATT CATCGAAAAT 
TATCTAAAAC CAAGTCGCCC GGTCGTTTTT ACCGACCTGG CAAAGGATTG GCCGGCTGTT
CAGAAATGGA CTTTTGACTG GCTCCGCGAG AACCACGGAA ACCTGGATGT GCCTCTGGTG
GACAACCACA TTCACGACGC TGACAAGTAT TTCCAGATCG CCAAAACCAT GAAATTCGGC
GATTACCTGA GCCTGATCGA GAAAGGCCCG ACCGATCTGC GCATTTTTCT TTTCGATATT
TTCAAGAAAA TCCCTGAACT CGCGGACGAC ATCCGGTTCC CGACGATCAT GGACGGCTTC
CTGAAATCTT ACAAATTTGT ATTTTTCGGA GGAGAAGGTT CGATCACCAA CCTGCATTAC
GATATGGACT GCTCGAACGT GTTCCTAACG CAGTTCCAGA CCCGCAAACA GGTGATTTTG
TTCTCTCCCG AAGAAAGCCG CCGATTGTAT CACCACCCGT TCACGGTGAT GAGCAAGGTA
AATCCGATTG ACCCGGATTA TGAAAAATTC CCGGCATTGA AAGGCGCCAC CGGCTATGAA
ACGATCCTTT ATCATGGCGA AACGATCTTT ATTCCTTCGC TTTGGTGGCA TTATATCCGT
TATGTGGATG GCGGTTTCAG CCTTGCATTG CGTGCCAACA ACTCCATTTT CACAGCGGTG
AAGGGCGGTA TGAACCTCGT TCGTCACCAG TTTGTGGATA AAAGCATGAC CAAGCTGCTC
GGTCTCGACT GGCAGCATTG GAAAGAAAAG AAAGCCGTTG AAAACGCACA AGGGCTTTTG
CAGAAGCAGG CCTGA
 
Protein sequence
MKLVPIEKRT GLTREEFIEN YLKPSRPVVF TDLAKDWPAV QKWTFDWLRE NHGNLDVPLV 
DNHIHDADKY FQIAKTMKFG DYLSLIEKGP TDLRIFLFDI FKKIPELADD IRFPTIMDGF
LKSYKFVFFG GEGSITNLHY DMDCSNVFLT QFQTRKQVIL FSPEESRRLY HHPFTVMSKV
NPIDPDYEKF PALKGATGYE TILYHGETIF IPSLWWHYIR YVDGGFSLAL RANNSIFTAV
KGGMNLVRHQ FVDKSMTKLL GLDWQHWKEK KAVENAQGLL QKQA