| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4620 |
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| Symbol | |
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| ID | 8228226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5580828 |
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| End bp | 5584259 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932469 |
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| Product | heme-binding protein |
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| Protein accession | YP_003088986 |
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| Protein GI | 255038365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02603] putative heme-binding domain, Pirellula/Verrucomicrobium type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCCA AAAAACATCT CAAAACACCC CTAACCCTGA TGGCGGCTAC CACGGTGGCG
GTAGTGTCGT GTATGAAAAT GGCCCCGATG TCGTCCGGGC CGGTGGTGAA GACCAACAGT
ACCAAAGTGG TTGTGAAGGA AGACCCCGCA ACTGGCAAAG CCAGGGCAAG GGAAATCCGT
GAAAAGACAG TCGTGAAGCT GGCCGACGGT CTGAAACTCG ACCTCTGGGC CTCCGATTCC
CTGGCGCCCG ATCCCGTGGC GATCGCGATG GACGACGCCG GCCGCGTGTA CCTGAACAGA
ACCAACCGCC AGAAGAATTC CGAATTCGAT ATCCGCGGGC ACCGCAACTG GATCACTGAA
TCCATCGCCT TGCAAACCGT AGAAGACCGC CGGAAATTTC TGCACAAGAC TTTCGCTCCC
GAAAAAAGCA AAGAAAATAA CTGGGTAAAA GACCTCAACG GTGACGGTTC GCACGACTGG
AAAGACCTCG CGGTTGAAAA AGATGAGGTT TGGCGCATTG AAGACACCGA CAACGACGGC
ATCGCCGACG TATCGATGCG CATTCTCGAC GATTTCTTCG ATGAAGTTTC CGACGTAGCG
GGCGGCCTGC TCGTCCGGGC AAAGGACGTT TTCGTGACGA TCGCGCCGGA TGTGTGGCGT
TTGCGAGATA CCAATGGCGA CGGTGTGCTC GACGAAAAGA CTTCTATCAG CCACGGATAT
GGCGTGCATA TCGGTTTCAG CGGGCACGGC ATGTCCAACC CGATCGAGGG CCCGGATGGT
AAGATTTACT GGAATATCGG CGACATTGGT GCTAATATCA CTACTGCCGA AGGCGTGAAA
CATGAGCATC CAAATTCAGG TATCATCGCC CGCTCCAACC CGGATGGCTC CGATTTCGAA
ATCTTCGCGC ACGGATTGCG TAACACGCAC GAGTTTGTGT TCGACGAATA CGGCAATCTC
ATCAGCTCCG ACAACGACGG CGATCACCCC GGCGAAAGCG AGCGTTTGGT GCACATAGTG
GAAGGCTCCG ATGCCGGCTG GCGCTCCAAC TGGCAATATG GCAAATACAC CGATCCCAAA
AACAATAGTT ACAAGGTTTG GATGGACGAA AAGTTGTTCA AACCACGCTG GGACGGTCAG
GCGGCCTATA TCATTCCTCC AATCCAAAAC TACCACAACG GACCAACCGG AATGCAGTAC
AACCCGGGAA CGGCATTGGG TAAGGAGTGG AAAAACAAAT TCTTCCTCGT GGAATTCGTC
GGTAACCCCG CGCGTTCGCC GATCTGGTCA TTCGGTTTGA AACCAAAAGG CGCTTCGTTC
GTGCTGGATG GCGAGAAGAA CATCCTGACG GGTATCCTGC CGACCGGTAT CCGCTTCGGT
CCGGACGGTG CCTTGTACGT GGCCGACTGG ATCAATGGCT GGGATACCAA AAACTACGGC
CGCGTGTGGA AACTGGACGT GACCGACGAG AAAAACGACC TGAAAGCAGT CCGCACGGAA
ACGAAGCGCT TAATGCAATT GGATTATCCC AAACAATCCG ACGATGCATT GCTGCCATTG
CTTTCGTACG AAGACATGCG TATCCGCCAG AAAGCACAGT TCGAACTCGC TTCCAGAGGC
GCAAAGGGCG CAGCGGTATT GACCAAAGCC ATTGAGCAAA AAAACAATCA GTTCGGCCGC
ATTCACGGGA TTTGGGGAAT GGGACAACTG GCGCGGCAGG ATAAGTCGTA TGCCAATGTG
CTCATGACGT TGTTGAAGGA TTCCGACGAA GAAATTACCG TGCAGGCGGC TAAGGTGCTG
GGCGACGCTA AAATTGCCGA GGCCGCGCCG ATGCTGATCC CAATGCTGAA AAGCAAAAAT
CCGCGTGTGC AATTCTTCGC TGCGCAGGCA CTCGGCCGCG TAAAAGACAA GAATGCCGTG
CAGCCATTGA TCGAGATGAT CAAAACAAAC AATGATGAGG ATGTGTACAT CCGTCACGCA
GGCGTACTGG CGCTCTCGCG CATAGGCGAT GCGGCACCGA TGGCGGCATT GGCTAGCAGC
CCAGAAAAAT CATTGCGGAT TGCCGGCGTA CTCGTGCTGC GCCGCATGAA AAACGAGCAG
ATCAGCGCAT TCCTGAAAGA CAAGGACGAA TACATCGTAA CGGAAGCCGC CCGCGGTATC
AACGACGACC TGTCTATTCC AGCTGCATTG CCTGCATTGG CGGGAGTTTT AAATGAAAAA
GGCTTCAAGT CCGAACCATT GCTGCGCCGC GCTATCAATG CCGCATTGCG CGTGGGTGGT
GAAACGCAAC TGAACGACCT TATTGCATTT GCGAAAAGAA AAGACGTGGA TCAGGAAATG
CGTGCGGAAG CACTGGCAAC GCTCGGAACC TGGGCTAGTC CATCGCTCAT GGACCGCGTC
GACGGACGCT ACCGCGGCCC GATCGAACGT GACCCGGCAG GTGTGAAAGC GAAGATCAAA
CCGATGGTCG CAGACATTTT GCAGGAAAAC GAACCGGCTA TCCGGATCGC CGCCGCGCAA
ATGCTGACTA ACCTCGGCGT AAGCGACAAC AACGCCACAC TGGCCAAAAT CCTGAACGAC
AGCTCCGATC CAAAAGTACG CGCAGCAATG CTCACCGCAT TGAACGAACT GAAATACACG
GATATGGAAA CCGTGATGAA AAAAGGAATG AGCGACTCCG ACGCCGATGT GCGCACAGCC
GCATTGGGCA TGGTAGGAAG TGTGAATATG TCGAAAGAAG CATTGGCTGA CATTTCGAAC
ACCATCTTCG AAAAAGGCAG CGTGCGCGAG CAGCAGCAGA TACTGAAAGT GCTCGGTAGC
CTGCCCGTAG ACAAAACCGA ACCGATTTTC AACGGCCTGA TCGGTAAAAT GGCGGATAAC
AAACTGCCTC AAAACCTGCT GCTCGACCTC GGCGAGGCTG TCGATTCAAC GAAATCCAGT
ACATTGATCG CCAAAATTGC ACCGCTTCGC AAGCAGGGCA ACACCGCCGC CGATTACCAG
GATGCATTGT TCGGCGGAAA CGCGCAGGCC GGCCGTCGCT ACTTCCTGAC GAGCTCCGCC
GCGGAATGCG TGCGTTGCCA CTCGATCGGC GGACAGGGCG GCGAAGTAGG ACCTAACCTT
TCGAACATCG GTAACGTCCT CTCGCGCGAG CAACTCCTTC AAGCGCTCAT CGAACCAAGC
GCACGCCTTT CACCGGGCTT CGGAATGGTG ATGCTGACAT TGAAGGACGG TACGTCCGCT
GCCGGCATTC TGGCGCAGGA AAACGAGCAC GAGCTGGTGC TGAAGACCTC GGAAGCCGAA
CCGCTAAAAA TCGCCGTTTC CCGCATTGCG AAGCGTGAGA ACGTGCCATC GAGCATGCCT
CCGATGGGAC ATATCATGTC GAAAAGAGAA ATCCGCGATG TGGTGGAGTT CCTCTCAACA
TTGAAAAAGT GA
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| Protein sequence | MISKKHLKTP LTLMAATTVA VVSCMKMAPM SSGPVVKTNS TKVVVKEDPA TGKARAREIR
EKTVVKLADG LKLDLWASDS LAPDPVAIAM DDAGRVYLNR TNRQKNSEFD IRGHRNWITE
SIALQTVEDR RKFLHKTFAP EKSKENNWVK DLNGDGSHDW KDLAVEKDEV WRIEDTDNDG
IADVSMRILD DFFDEVSDVA GGLLVRAKDV FVTIAPDVWR LRDTNGDGVL DEKTSISHGY
GVHIGFSGHG MSNPIEGPDG KIYWNIGDIG ANITTAEGVK HEHPNSGIIA RSNPDGSDFE
IFAHGLRNTH EFVFDEYGNL ISSDNDGDHP GESERLVHIV EGSDAGWRSN WQYGKYTDPK
NNSYKVWMDE KLFKPRWDGQ AAYIIPPIQN YHNGPTGMQY NPGTALGKEW KNKFFLVEFV
GNPARSPIWS FGLKPKGASF VLDGEKNILT GILPTGIRFG PDGALYVADW INGWDTKNYG
RVWKLDVTDE KNDLKAVRTE TKRLMQLDYP KQSDDALLPL LSYEDMRIRQ KAQFELASRG
AKGAAVLTKA IEQKNNQFGR IHGIWGMGQL ARQDKSYANV LMTLLKDSDE EITVQAAKVL
GDAKIAEAAP MLIPMLKSKN PRVQFFAAQA LGRVKDKNAV QPLIEMIKTN NDEDVYIRHA
GVLALSRIGD AAPMAALASS PEKSLRIAGV LVLRRMKNEQ ISAFLKDKDE YIVTEAARGI
NDDLSIPAAL PALAGVLNEK GFKSEPLLRR AINAALRVGG ETQLNDLIAF AKRKDVDQEM
RAEALATLGT WASPSLMDRV DGRYRGPIER DPAGVKAKIK PMVADILQEN EPAIRIAAAQ
MLTNLGVSDN NATLAKILND SSDPKVRAAM LTALNELKYT DMETVMKKGM SDSDADVRTA
ALGMVGSVNM SKEALADISN TIFEKGSVRE QQQILKVLGS LPVDKTEPIF NGLIGKMADN
KLPQNLLLDL GEAVDSTKSS TLIAKIAPLR KQGNTAADYQ DALFGGNAQA GRRYFLTSSA
AECVRCHSIG GQGGEVGPNL SNIGNVLSRE QLLQALIEPS ARLSPGFGMV MLTLKDGTSA
AGILAQENEH ELVLKTSEAE PLKIAVSRIA KRENVPSSMP PMGHIMSKRE IRDVVEFLST
LKK
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