Gene Dfer_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4607 
Symbol 
ID8228213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5565670 
End bp5566593 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content54% 
IMG OID644932456 
ProductPE-PGRS family protein 
Protein accessionYP_003088973 
Protein GI255038352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT ATGACCGCGC AGGCGGACGG GCAAGGCTGA TCCTTTCTTC ACTGATTTTC 
TGCGTAACCT TTTCATGCGG AGATCCCGAG CCGTCGCCGG GTGGGGGAGG GCTTTCGGAC
CAGTTCGAAA CCGCTCCCGA ACAGTCGCCG ATCACTCCGG GCATCATCGA CGAAGCATCC
GGCCTGGCCG CGAGCGCAAC AATGCCGGGT TACCTCTGGA CAATACAGGA TTCGGGCCAG
CCCAACTCGC TTTACCTCAT CAGCAGGGAT GGAAAAACGA TCAAGGAATA TAACTTGCCG
GGGAGCAACA ACCGCGATTG GGAGGAAGTA GCGATCGGCC CCGGCCCTGA GAATGGCGTT
TCCTACGCCT ACATCGCGGA TATCGGCAAT AATAACCAGC CGATAGCTCC CACCAACACC
ATTTACCGCA TTCCCGAAAT CTCCGGAGCT GACGGCTCGT TTAGCCAGAA TGCATTGCAA
AAGATCACAT TCAGCTATCC CGACGGCCCC CGCGATGCCG AGGCGCTGAT CGTAGACCCG
CAAACGAGAG ATATTTTTGT GTTATCGAAA GAAATGACGG GCACCAATAT CTACCGCCTG
GGCTATCCGC AATCGATCAC CGACGTGAGC GTGGCCGAAA AAGTGGGATC AGTACCCGGC
GTGCTGCTCA CCACTGCCAG CAGCATTTCC AAAGACGGCA GCGAAATCCT CGTACGCAGC
TATCTGGGCG TTTATTATTG GAGAAGGAAC AATGGCGAAA GCGTAACCCA GGCACTCACC
CGGTCGCCCA ACAAAACCTT GACGGTCGCT GCCGAACCGC AGGGAGAGGC AATCTGTTTC
GAGCATGACA ACAAAGGCTT TTACACTTTG AGTGAAAAAG GGAATGCCGC GAGTGTGTCA
CTTAATTTTT ACAAAAGAAA ATAA
 
Protein sequence
MKIYDRAGGR ARLILSSLIF CVTFSCGDPE PSPGGGGLSD QFETAPEQSP ITPGIIDEAS 
GLAASATMPG YLWTIQDSGQ PNSLYLISRD GKTIKEYNLP GSNNRDWEEV AIGPGPENGV
SYAYIADIGN NNQPIAPTNT IYRIPEISGA DGSFSQNALQ KITFSYPDGP RDAEALIVDP
QTRDIFVLSK EMTGTNIYRL GYPQSITDVS VAEKVGSVPG VLLTTASSIS KDGSEILVRS
YLGVYYWRRN NGESVTQALT RSPNKTLTVA AEPQGEAICF EHDNKGFYTL SEKGNAASVS
LNFYKRK