| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4579 |
|---|
| Symbol | |
|---|
| ID | 8228183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5524946 |
|---|
| End bp | 5526241 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644932426 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_003088945 |
|---|
| Protein GI | 255038324 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.730826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG ACGTACTACT TGGTCTTCAA TGGGGAGACG AGGGAAAAGG AAAAATTGTG
GATGTCCTGG CGCCGCGCTA TCAGGTTGTA GCCCGTTTTC AGGGTGGCCC TAATGCCGGA
CACACATTGG AGTTCGACGG TATCAAACAC GTGCTGCACC AGATTCCGTC GGGGATTTTC
CGCAGCGATA TCCAGAATAT CATCGGAAAC GGCGTCGTGC TCGACCCGGT TGTTTTCAAA
AGAGAAATTG AAGGCCTTGC GAAATACAAC CTCGACCTGA TCAGCAACCT GTTCGTGTCG
AAAAAAGCTT CGCTGATCGT CCCTACCCAC GCCCTGCTCG ACGCCGCTTA TGAGCGTTCG
AAAGGTGATT CCAAGATCGG CTCAACTTTG CGCGGAATCG GTCCTGCTTA CCAGGATAAA
GTTGCCCGCC TCGGCTTGCG TGTAGGAGAT ATTCTTTCTC CGAATTTTGC AGCCAAATAC
AAAAAACTCG TTGATGCCCA CAAGGTTATC CTCGATTTCT ATTCGTTCGA TTACTCGGAG
ACATTGCCGG CGGCAGAGGG AAAATTTACG GATGCCATCG AATTCATGAA GCAATTTACG
CTCGTGAACA GCGAATATCT CGTAAACGAC GCATTGACAG AAGGTAAAAC CGTGCTCGCG
GAAGGCGCGC AAGGCTCATT GCTCGACATC GATTTCGGTT CATACCCATT CGTAACCAGC
TCTACCACCA TGACTGCCGG TGCTTCTACC GGATTGGGCA TTGCGCCGCG TCAGATTGGG
GAGGTGTTTG GTATTTTCAA AGCTTACTGC ACGCGTGTGG GAAGCGGTCC GTTCCCGACT
GAATTGCATG ATGAAACCGG TGAACAGATC CGTCAGGAAG GCCGCGAGTT CGGTGCTACT
ACCGGTCGTC CGCGCCGTAC CGGCTGGCTC GATCTGCCTG CATTGAAATA CGCAATCATG
ATCAACGGCG TAACGCAGCT GATTATGATG AAAGTAGACG TGCTGACCAT TTTTGATAAC
ATTAAAGTGT GTACCCACTA CCGCCTCGCG GATGGTACGC TCACCGACCA ACTGCCTTAC
GACCTTTGCG ACGAGGCTGT TGAACCGGTT TACAAGGATT TCAAAGGCTG GCAAACTTCC
CTGGACGGCG TTCGTGATTT CGACGCAATC CCAGCGGAAC TGAATGCCTA CGTGAAGTTT
CTCGAAGAGG AATTGAACCT GCCAATCACA TTCATTTCAA CCGGTCCAGA CCGCGAAGCG
CTCATCAGCC GGGAAGCGGC TGCCGCGCAA GCTTAG
|
|---|
| Protein sequence | MKVDVLLGLQ WGDEGKGKIV DVLAPRYQVV ARFQGGPNAG HTLEFDGIKH VLHQIPSGIF
RSDIQNIIGN GVVLDPVVFK REIEGLAKYN LDLISNLFVS KKASLIVPTH ALLDAAYERS
KGDSKIGSTL RGIGPAYQDK VARLGLRVGD ILSPNFAAKY KKLVDAHKVI LDFYSFDYSE
TLPAAEGKFT DAIEFMKQFT LVNSEYLVND ALTEGKTVLA EGAQGSLLDI DFGSYPFVTS
STTMTAGAST GLGIAPRQIG EVFGIFKAYC TRVGSGPFPT ELHDETGEQI RQEGREFGAT
TGRPRRTGWL DLPALKYAIM INGVTQLIMM KVDVLTIFDN IKVCTHYRLA DGTLTDQLPY
DLCDEAVEPV YKDFKGWQTS LDGVRDFDAI PAELNAYVKF LEEELNLPIT FISTGPDREA
LISREAAAAQ A
|
|---|
| |