Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4570 |
Symbol | |
ID | 8228173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5514318 |
End bp | 5515379 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932416 |
Product | NHL repeat containing protein |
Protein accession | YP_003088936 |
Protein GI | 255038315 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.532406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA CACATTCCCG CCGTCAGTTC GCGAAAATCA CAGCCGCTAC TGCCGCCGCC CTTACTTTTA AGCCATTTTA CATTCTGCAC GCCAGGCCCA AAGCGGATGG CGAAGTGATT GGGCACGGTA ACCACCGATA CAAAGTCCAC CAGGGCTGGG GCAACCTGGA TGCCTCGCAG TTTCCGGTGA ACAACTGCCA CGAAATGGTG CAGGACAGCA AAGGGAGGCT CATTATGGTG GGGGATGAAA TTAAAAACAA CATCCTGATC TACGACCGCT CGGGCAAGCT GCTTGAAAGC TGGGGACACG AGTTTCCCGG CGGCCACGGG CTCACGCTCT GGAATGCCAA TGGCGAAGAA TTCCTTTTCA TCAGCGATCC GAACATAGGA AAGGTTTTCA AAACCGATCT GAAAGGTAAA ATCCTGCTTA CAATCGAGCA TCCTTCGAAA GTAGGAGCTT ATAAGGAAAA CGACCCTTTC AAACCGACTG AAACGGCCAT CGGGCCCGAC GGCACCATTT ACATCGCCGA CGGCTACGGC TCACAATGGA TTTTGAGATA CACGCCCAAG GGCGAATTCA TCGACAAGTT CGGCGGCTCG GGCGACGGCG ACGCGCAATT CTCCACCGCG CACGGCATCG CAATCGACTC CCGCGACAAG GCCAACCCGA CGCTCATCGT AACCTCCCGC GCGCACAATG CATTCAAGAA ATTCACATTG GACGGCAAAT ACCTCAGCAC AATCTTCCTG CCCGGCGCAT TCGTCTGCCG CCCTGTTTTC AAGGACGACA CGCTGTACGC GGGCGTCTGC TGGTCGCGGT TGCGCTATTT GAACCAGACC CCAAACTCAG GTTTCGTAAC GATTCTCGAC AAATCCAATA AGGTTATATC CAACCCCGGC GGCACCAAGC CGACTTACCA AAACGGCGAA CTGCAACTGA TGGTGCAGGA AAAACCGATT TTCATGCATT GCCACGATGT GTGCGTGGAT AACGATCACA ACATTTACGT GTGCCAGTGG AACGCGAAGA AGACCTATCC GGTAAAACTG GAAAGGGTTT AA
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Protein sequence | MSDTHSRRQF AKITAATAAA LTFKPFYILH ARPKADGEVI GHGNHRYKVH QGWGNLDASQ FPVNNCHEMV QDSKGRLIMV GDEIKNNILI YDRSGKLLES WGHEFPGGHG LTLWNANGEE FLFISDPNIG KVFKTDLKGK ILLTIEHPSK VGAYKENDPF KPTETAIGPD GTIYIADGYG SQWILRYTPK GEFIDKFGGS GDGDAQFSTA HGIAIDSRDK ANPTLIVTSR AHNAFKKFTL DGKYLSTIFL PGAFVCRPVF KDDTLYAGVC WSRLRYLNQT PNSGFVTILD KSNKVISNPG GTKPTYQNGE LQLMVQEKPI FMHCHDVCVD NDHNIYVCQW NAKKTYPVKL ERV
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