| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4568 |
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| Symbol | |
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| ID | 8228171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5511008 |
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| End bp | 5513338 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932414 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003088934 |
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| Protein GI | 255038313 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTG CCCGTTATTT GCTGCTCACC GTAGTGCTGT CACTCCATTC GCTGATGGCC
CTGGCCCAAA AGCCGGCTTG CGAATGCTTT GTGAAAGGTA TTGTGAAAGA CCGGCACACC
GGCCAGCCGA TCATCGGCGC GACGGTACTT ATCGTAGGCC AGAGCAACGG CGTTTTTACG
GACGAGCATG GCCGGTACGA GCTCAAAAAC CTCTGTCCGG GCAATTATAC GCTGGAATGC
CGCATTATCG GCTACAATCC ATTTCAGCAA AAAGTGGATC TGACGGCCGG GCATGAAGAG
AATTTCAATC TGCTCGAACA GGAAGTGCAT TTGCACGATG TGGAGATCAC CGCACACCGA
ACTGATGCGC CTTCTTCCCA GCCATTGACC ATGATTTCGG GTGCAGATTT GGACAAAACC
CGCGGCCAGA CGCTCGGCGA AAGCCTCAAA GGCGTGACCG GCGTGACGAC GCTGCAAACC
GGCTCATCCA TCGCCAAACC CGTCATCCAC GGCCTGCATA GCAACCGCGT GCTGATCATG
AACAACGGCA TTCGTCAGGA AGGCCAGCAA TGGGGCTCGG AACACGCACC GGAAATCGAC
CCGTTCATCG CCACGCGCAT TTCCGTTGTG AAGGGCGCTG CTGGTGTGCG CTACGGCTCC
GACGCGATCG GCGGGGTGAT ACTGGTAGAG CCGGAAGAGC TGCCGGTGGA TAAACCCATT
ACCGGTGAAC TGAATGCGGT TGGCTTTTCC AATGGGCGGC AGGGCGTATT ATCCGGCACG
GTGCAAGGCG GGCTGAATTT TGTCAAAGGG TTTGGCTGGC GCGCGCAGGG CACGATCAAG
CGGGGCGGGA ACATCCGCAC GCCGAATTAT TTTCTGGACA ACACCGGGAT TAGCGAAAAC
AACTTCTCGC TCGCAGCCGG TTACCGTCAC AAAGGTTTGG GCATTGATGT ATTTTACAGT
CGTTTCGACA CACAAATAGG CATTTTCTCG GGGTCGCACA TTGGGAGCGT CACCGATTTA
CTCAACGTTA TCAAGCATGG CGAGCCGCTC ATCAAATCGG GTTTTAGTTA TGCCATCAAC
CGGCCTAACC AGAATGCGAC GCACGAATTG CTGAAAGCCG AAACGCATTA CCATTTCAAC
GATGGCAACC GACTGCAATG GACGATCGCG CGGCAGTACA ACAACCGCAA CGAGTTCGAT
TTGCACCGCC CGCGGAACGA CAGCATAGCG GCACTGAACC ATCCTGAACT GTCATTTAAA
CTCACTTCAT TGACAAACGA CGTGGTATGG GACCACAAGC CCGTTGCCGG GAAAATCAGC
GGACAGGTTG GCGTGAGTAC ATTGTACCAA TACAACCTCA TGAGCGGCCG TCCGCTGATC
CCAAATTTTA ACCAGTTCAA TATCGGGCTA TTCTGGATTG AGCGGCTCGT GACCAGCAAG
TGGGAGCTCG AAGCAGGCCT GCGTTATGAT TACCGGACGT TGAAAACCTA TCGGATCGTG
AACCGCGAAA AGATCGCCAA CCATTTCGAT TTCGGCAACT TTTCGGGCAC TGCGGGCGCT
ACCCGCAACT TTTCCGAACG CTTTTCCGCG CGTGTGAACG TGGGTACGAC CTGGCGCGCG
CCGAACGTGA GCGAGCTGTT CAGCGACGGT GTGCACCACG GCGCAGCTGC TTACGAGCAA
GGCGATGCCA GCTTGCAGCC CGAAAAAGCC CTCAATTCCA TTGCCAGCGT GAAATACCTA
GCGCCGAAAT GGAGCCTGGA AGTGGGTGGT TATTACAATT ACATTTTTGA TTTTATATAC
TTGAAACCAC AGCCCGAGCC GATTCTGACC ATCCGTGGCG CATTTCCTTA CTTTAAATAC
ACCCAAACCG ACGCTTCGTT CAAAGGCATC GACGTGTCGG GAAGCTGGGA ATTTGTGAAG
CGCACGACGG TTTCGAGCAA GCTCACGTAC CTGCGTGTGT ACGACGAGCG TAATGATGGT
TACCTGGTGA TGATCCCGCC CAACCGGCTC GACAATGCAT TGAAATACCA GTTCGCCGAC
CGCGGCAAAT GGAAAGATGG CTTTATTTCT GTCGGTAACC TGCTGGTAGC GGAGCAAAAG
CGGGTTCCCG CTAACAGCGA TTTCATGCCT CCGCCGAAAG CCTATTCGCT GTGGAGCCTG
CAAGCCGGCG CGACGCTGAA AATCTCCGAC AAACAACAAC TGGAAATCGG GGTGAATGTA
CAAAATGTGT TCAACACCGT TTACCGGGAT TATCTGAACC GCTTCCGCTA CTACACCGAC
GACATGGGCC GCAATGCATC ACTACGGTTG AAATGGAAGT TTGGGGCTTA G
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| Protein sequence | MPFARYLLLT VVLSLHSLMA LAQKPACECF VKGIVKDRHT GQPIIGATVL IVGQSNGVFT
DEHGRYELKN LCPGNYTLEC RIIGYNPFQQ KVDLTAGHEE NFNLLEQEVH LHDVEITAHR
TDAPSSQPLT MISGADLDKT RGQTLGESLK GVTGVTTLQT GSSIAKPVIH GLHSNRVLIM
NNGIRQEGQQ WGSEHAPEID PFIATRISVV KGAAGVRYGS DAIGGVILVE PEELPVDKPI
TGELNAVGFS NGRQGVLSGT VQGGLNFVKG FGWRAQGTIK RGGNIRTPNY FLDNTGISEN
NFSLAAGYRH KGLGIDVFYS RFDTQIGIFS GSHIGSVTDL LNVIKHGEPL IKSGFSYAIN
RPNQNATHEL LKAETHYHFN DGNRLQWTIA RQYNNRNEFD LHRPRNDSIA ALNHPELSFK
LTSLTNDVVW DHKPVAGKIS GQVGVSTLYQ YNLMSGRPLI PNFNQFNIGL FWIERLVTSK
WELEAGLRYD YRTLKTYRIV NREKIANHFD FGNFSGTAGA TRNFSERFSA RVNVGTTWRA
PNVSELFSDG VHHGAAAYEQ GDASLQPEKA LNSIASVKYL APKWSLEVGG YYNYIFDFIY
LKPQPEPILT IRGAFPYFKY TQTDASFKGI DVSGSWEFVK RTTVSSKLTY LRVYDERNDG
YLVMIPPNRL DNALKYQFAD RGKWKDGFIS VGNLLVAEQK RVPANSDFMP PPKAYSLWSL
QAGATLKISD KQQLEIGVNV QNVFNTVYRD YLNRFRYYTD DMGRNASLRL KWKFGA
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