| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4556 |
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| Symbol | |
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| ID | 8228159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5498491 |
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| End bp | 5499963 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932402 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_003088922 |
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| Protein GI | 255038301 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.249745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.558006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG AAAACAAACC GAAAGACGTT AACCGCCGGG ACTTTATCCA GAAGACCTCC
GCCGCGGCCA TTGGAAGTTT CTTCATAGTT CCCCGCTACG TGCTGGGAAA AGGATATAAA
GCTCCGAGCG ACAAACTGAA TATCGCCGGT ATCGGTGTGG GTGGAAAAGG TTTTTCTGAC
ACGAACAATG CATGGAACAA AGGTGCCGAA AACCTCGTGG CACTTTGCGA TGTAGACTGG
AACCAGGCGA AGAAGAACTT CGAACTGCAC CCGACTGCCA AAAAATACAA GGACTTCCGC
AAGATGTTCG ACGAAATGGA CAAGGATATC GACGCGGTAA CGGTATCGAC GGCCGACCAC
ATGCACGCGA TCATCGCCAT GAACGCCATG CAGCGCGGCA AGCACGTGTA CGTTCAGAAA
CCCCTTACGC ACAATATTTA CGAGGCCCGC ATGCTCACCG AAGCTGCCCG CAAATACAAG
GTAGTAACCC AAATGGGTAA CCAGGGAGCG TCCAACCCCG CACAGACGCA GATGAAGGAG
TGGTTCAACA AAGGCCTCAT CGGTAATGTG CACGAGGCGC ACGTTTGGAC TAACCGTCCC
GTGTGGCCGC AAGGCATTCC CGTTCCGACC AGCAAGCAGG AAGTACCGGC GGACATCGAC
TGGGAATTGT GGGTAGGCTG CGCCGAATGG GTAGATTACA GCCCGGCATG GCACCCATTC
AAATGGAGAG GCTGGTGGAA CTTCGGTACC GGCGCATTGG GCGATATGGG TTGTCACCTG
ATCGACCCGG CTTTCCGTAC GCTTGGATTG GGTTATCCAA CGGAAGTTGA ATGTTCCGTA
GGCCAGGTGT TCATCAAAGA CTGGACAGCC GAGTACATTC CGGAAGGCTG CCCGCCGTCA
TCACGCGTGC AATTGAAGTT CCCTGCAAAC AAAGTGAACA AATCCGAAGT GACGTTGACC
TGGCACGACG GCGGTCTGCG CCCATTCCAC CCGGATCTGA TCCCTGCCAA CGACCCGCTT
GGCGAGCCCG ACAGCAGCAA TGGCGTGCTT TTGATTGGTG AAAAAGGCGT AATGACCTGC
GGAACTTACG GTATCGCGCC GAAAGTATAT CTCAAAGACG GCACCAAGCT CGAATATAAG
CAAGGCGATT TCGGGAACGA ATACACCACC ATGCCGGAGT TTGGTCACCA CGTATCGTGG
AGCGATGCCT GCAAGGCTGG TTTCAACAGC AAGGAGCACA AAGCGCTCAC GTCATCGTTC
GACTACGCTG GTCCGTTGAC GGAAACTGTG ATCATGGGTA ACCTCGGTAT CCGCAGCTAC
AACCTCCGCA CCGCGAAGGC CGACGGCAAA GGATTCGACT ACCCAGGCCG CAAAAAACTG
TTGTGGGATG GCAAAAACAT GAAGGTTACC AACTTCGACG AAGCGAACCA GTTTGTATCC
CGCAAATACC GCGGTGACTG GAAACTGGCA TAA
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| Protein sequence | MSTENKPKDV NRRDFIQKTS AAAIGSFFIV PRYVLGKGYK APSDKLNIAG IGVGGKGFSD
TNNAWNKGAE NLVALCDVDW NQAKKNFELH PTAKKYKDFR KMFDEMDKDI DAVTVSTADH
MHAIIAMNAM QRGKHVYVQK PLTHNIYEAR MLTEAARKYK VVTQMGNQGA SNPAQTQMKE
WFNKGLIGNV HEAHVWTNRP VWPQGIPVPT SKQEVPADID WELWVGCAEW VDYSPAWHPF
KWRGWWNFGT GALGDMGCHL IDPAFRTLGL GYPTEVECSV GQVFIKDWTA EYIPEGCPPS
SRVQLKFPAN KVNKSEVTLT WHDGGLRPFH PDLIPANDPL GEPDSSNGVL LIGEKGVMTC
GTYGIAPKVY LKDGTKLEYK QGDFGNEYTT MPEFGHHVSW SDACKAGFNS KEHKALTSSF
DYAGPLTETV IMGNLGIRSY NLRTAKADGK GFDYPGRKKL LWDGKNMKVT NFDEANQFVS
RKYRGDWKLA
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