Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4547 |
Symbol | |
ID | 8228150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5488424 |
End bp | 5490250 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644932393 |
Product | hypothetical protein |
Protein accession | YP_003088913 |
Protein GI | 255038292 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.738762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAAG CGGGGACTAT CATTCTCTTT CTGGCCCTAT TATCAGGCCC TTCGCGCATT CTGGGACAGG CTTTGCCATT AGGTCAATGG CAAAGCCATT TCAATTACCT TTCAGCACAG GAAGTTGTTC AAACCGGTGC GCGCGTCTAT TGCGCTTCCT ACAACGGACT GTTTTCCATT GAAATAGCGA GCGGCGAATC CAAAACGCTT TCCAAAGCGG ATGGGATCAG CAGCACGGGC ATTGGTGCCA TGGGTTATTT GCCGGCATCA AACCTTCTCT TGCTCGCCTA CCGGAACGGG ATCATCGATT TTGTGTATCT CAATGAACAA TCCGAGCCCG ACCAGATAGA TACATGGGAC CTGCTGAACA CGACCCAGGG CCTCCCGGCC GACAAGGGCA TCCGGCGCAT TGTTTTTAGG GAAAATCTGG CCTTTATCGC CACCAGTTTC GGGATTTTGG TGCTCGATAC CCAGCTCAAA CAAGTTAAGG AAACCTATCG CTACATCGGT CCGGGCGGTA CGCAGACAGC CATTACCGAC CTGGCATTTT CGGGCGATTC GCTCTTTGCA TTAACTTCCC AGGGACTCCT GGCAACGTCG ATGCGCGATG ATGTGAACCG CCAGTATTTT GCCAACTGGA AACCGGTAAC AACCCCGGGC GCCATTTCAG GCATTGCGTT TTTTTCGGGG GCGGTTCACA CGGCCGTTTC AGGTAAGGGT GTATTTAAAT ATGAAAATGG CGGCTGGAAG CTCGTTTACA CGTCTGGTAG CGGCAACCTT CGGATTCTCG ACGCCGGCGA CCTGCTGACA GTTACCACCG GAACCAGCAT TTTCACCCTC GACAAACTTT ACGCGGCCCA GACATTCAAT AGCCCGCTTT TCAAAAACGT CCGATCGGGT ATCCGCGCAG AATCAGCGAA GTTCTGGATT GCAGACCGCA CAAGCGGATT AATCACCAAC CAATATTCCG ATTTCAAGTC AGTATCCCCA GCCCAGGGCG ACACCACCAT TTCGCCCCGC CCCGACTCGG TCATTACCGA TCTCAACGGC TTGTCGTGGA CGAGGCTGCC CGAATCCCTG GGCGGCGGCA TCATGGTGAG CAATCCCGAC GGTTCGCGAA AAAAGGTGTT ATCCACATCG GTCGGGACCG GCACATTGCC CGCGTCGAAG ATCAACAGCC TGGCTTTGGA CCAGAATGGC TACGTCTGGT TTGCGAGCGC ACGAGGCGTT GGGTATTTTG TGGCGGACGG TGTGCTGGAA GCGCCGCGGG TAGACGCGAT TCTACCGGTT TACGGCCAAA GAAGGCTTTT TAACAACGAA GAATGTACTG CACTGGCCGT CGAGCCGGGC AACCGGAAAT GGATCGGGAC CCGGACGGGG CTGTATCAGT TTAATGCGGA CGGTACGGAG CTGGTAAAGC GATTTACCGC TGCCGACAGT CCGCTGCCCT CCGACGACAT CCGCGCATTA CGCTTCGAGC CCGAAACCGG CTTGCTTTTC GCTGACACCC CGGCTGGCAT GGTTTCTTAC CAGTCCGATG CTGCAGCGCC GGCCGAGCGA TTGTCCGGCA TTACAATATT TCCCAATCCC GTGCGGCCCA GCTACTCGGG GAATGTGGGC ATCAAAGGCC TCACCAACCA ATCTAGCGTG AAAATAACCG ATCTGGCAGG CAGGCTGGTA TTCGAAACAC GCTCGGAAGG CGGTATGGCC TCCTGGAATC TGAACGACTA CACCGGCCGC CGCGCGCGGG CTGGGATATA TATTGTATTC GTCGTTTCAG CCGACGGGTC CGGCCACGAG GCGGGCAAGT TGGCAATAAT CAATTAA
|
Protein sequence | MRKAGTIILF LALLSGPSRI LGQALPLGQW QSHFNYLSAQ EVVQTGARVY CASYNGLFSI EIASGESKTL SKADGISSTG IGAMGYLPAS NLLLLAYRNG IIDFVYLNEQ SEPDQIDTWD LLNTTQGLPA DKGIRRIVFR ENLAFIATSF GILVLDTQLK QVKETYRYIG PGGTQTAITD LAFSGDSLFA LTSQGLLATS MRDDVNRQYF ANWKPVTTPG AISGIAFFSG AVHTAVSGKG VFKYENGGWK LVYTSGSGNL RILDAGDLLT VTTGTSIFTL DKLYAAQTFN SPLFKNVRSG IRAESAKFWI ADRTSGLITN QYSDFKSVSP AQGDTTISPR PDSVITDLNG LSWTRLPESL GGGIMVSNPD GSRKKVLSTS VGTGTLPASK INSLALDQNG YVWFASARGV GYFVADGVLE APRVDAILPV YGQRRLFNNE ECTALAVEPG NRKWIGTRTG LYQFNADGTE LVKRFTAADS PLPSDDIRAL RFEPETGLLF ADTPAGMVSY QSDAAAPAER LSGITIFPNP VRPSYSGNVG IKGLTNQSSV KITDLAGRLV FETRSEGGMA SWNLNDYTGR RARAGIYIVF VVSADGSGHE AGKLAIIN
|
| |