Gene Dfer_4547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4547 
Symbol 
ID8228150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5488424 
End bp5490250 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content55% 
IMG OID644932393 
Producthypothetical protein 
Protein accessionYP_003088913 
Protein GI255038292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.738762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAG CGGGGACTAT CATTCTCTTT CTGGCCCTAT TATCAGGCCC TTCGCGCATT 
CTGGGACAGG CTTTGCCATT AGGTCAATGG CAAAGCCATT TCAATTACCT TTCAGCACAG
GAAGTTGTTC AAACCGGTGC GCGCGTCTAT TGCGCTTCCT ACAACGGACT GTTTTCCATT
GAAATAGCGA GCGGCGAATC CAAAACGCTT TCCAAAGCGG ATGGGATCAG CAGCACGGGC
ATTGGTGCCA TGGGTTATTT GCCGGCATCA AACCTTCTCT TGCTCGCCTA CCGGAACGGG
ATCATCGATT TTGTGTATCT CAATGAACAA TCCGAGCCCG ACCAGATAGA TACATGGGAC
CTGCTGAACA CGACCCAGGG CCTCCCGGCC GACAAGGGCA TCCGGCGCAT TGTTTTTAGG
GAAAATCTGG CCTTTATCGC CACCAGTTTC GGGATTTTGG TGCTCGATAC CCAGCTCAAA
CAAGTTAAGG AAACCTATCG CTACATCGGT CCGGGCGGTA CGCAGACAGC CATTACCGAC
CTGGCATTTT CGGGCGATTC GCTCTTTGCA TTAACTTCCC AGGGACTCCT GGCAACGTCG
ATGCGCGATG ATGTGAACCG CCAGTATTTT GCCAACTGGA AACCGGTAAC AACCCCGGGC
GCCATTTCAG GCATTGCGTT TTTTTCGGGG GCGGTTCACA CGGCCGTTTC AGGTAAGGGT
GTATTTAAAT ATGAAAATGG CGGCTGGAAG CTCGTTTACA CGTCTGGTAG CGGCAACCTT
CGGATTCTCG ACGCCGGCGA CCTGCTGACA GTTACCACCG GAACCAGCAT TTTCACCCTC
GACAAACTTT ACGCGGCCCA GACATTCAAT AGCCCGCTTT TCAAAAACGT CCGATCGGGT
ATCCGCGCAG AATCAGCGAA GTTCTGGATT GCAGACCGCA CAAGCGGATT AATCACCAAC
CAATATTCCG ATTTCAAGTC AGTATCCCCA GCCCAGGGCG ACACCACCAT TTCGCCCCGC
CCCGACTCGG TCATTACCGA TCTCAACGGC TTGTCGTGGA CGAGGCTGCC CGAATCCCTG
GGCGGCGGCA TCATGGTGAG CAATCCCGAC GGTTCGCGAA AAAAGGTGTT ATCCACATCG
GTCGGGACCG GCACATTGCC CGCGTCGAAG ATCAACAGCC TGGCTTTGGA CCAGAATGGC
TACGTCTGGT TTGCGAGCGC ACGAGGCGTT GGGTATTTTG TGGCGGACGG TGTGCTGGAA
GCGCCGCGGG TAGACGCGAT TCTACCGGTT TACGGCCAAA GAAGGCTTTT TAACAACGAA
GAATGTACTG CACTGGCCGT CGAGCCGGGC AACCGGAAAT GGATCGGGAC CCGGACGGGG
CTGTATCAGT TTAATGCGGA CGGTACGGAG CTGGTAAAGC GATTTACCGC TGCCGACAGT
CCGCTGCCCT CCGACGACAT CCGCGCATTA CGCTTCGAGC CCGAAACCGG CTTGCTTTTC
GCTGACACCC CGGCTGGCAT GGTTTCTTAC CAGTCCGATG CTGCAGCGCC GGCCGAGCGA
TTGTCCGGCA TTACAATATT TCCCAATCCC GTGCGGCCCA GCTACTCGGG GAATGTGGGC
ATCAAAGGCC TCACCAACCA ATCTAGCGTG AAAATAACCG ATCTGGCAGG CAGGCTGGTA
TTCGAAACAC GCTCGGAAGG CGGTATGGCC TCCTGGAATC TGAACGACTA CACCGGCCGC
CGCGCGCGGG CTGGGATATA TATTGTATTC GTCGTTTCAG CCGACGGGTC CGGCCACGAG
GCGGGCAAGT TGGCAATAAT CAATTAA
 
Protein sequence
MRKAGTIILF LALLSGPSRI LGQALPLGQW QSHFNYLSAQ EVVQTGARVY CASYNGLFSI 
EIASGESKTL SKADGISSTG IGAMGYLPAS NLLLLAYRNG IIDFVYLNEQ SEPDQIDTWD
LLNTTQGLPA DKGIRRIVFR ENLAFIATSF GILVLDTQLK QVKETYRYIG PGGTQTAITD
LAFSGDSLFA LTSQGLLATS MRDDVNRQYF ANWKPVTTPG AISGIAFFSG AVHTAVSGKG
VFKYENGGWK LVYTSGSGNL RILDAGDLLT VTTGTSIFTL DKLYAAQTFN SPLFKNVRSG
IRAESAKFWI ADRTSGLITN QYSDFKSVSP AQGDTTISPR PDSVITDLNG LSWTRLPESL
GGGIMVSNPD GSRKKVLSTS VGTGTLPASK INSLALDQNG YVWFASARGV GYFVADGVLE
APRVDAILPV YGQRRLFNNE ECTALAVEPG NRKWIGTRTG LYQFNADGTE LVKRFTAADS
PLPSDDIRAL RFEPETGLLF ADTPAGMVSY QSDAAAPAER LSGITIFPNP VRPSYSGNVG
IKGLTNQSSV KITDLAGRLV FETRSEGGMA SWNLNDYTGR RARAGIYIVF VVSADGSGHE
AGKLAIIN