| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4524 |
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| Symbol | |
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| ID | 8228127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5458473 |
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| End bp | 5459195 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932370 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003088890 |
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| Protein GI | 255038269 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000306542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.871136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGA AGGCCATTCT CGTGGACGAC GAACCCCACG CTATCGAAAT ACTGGACAAC
TACCTCGCCA ATTTCGCCGA AATTGAAGTC GCTGCGCGCT GCCAGGACGC GATCCAGGCA
TTTCAGGTGT TGCAGCAGCA GAAAATCGAC CTTATGTTCC TCGACGTGAA AATGCCCGGA
CTGAAAGGTA CCGACCTGCT CCGGAGCCTC AAAAACCCGC CCAAAGTCGT TTTTACCACC
GCTTACCAGG ATTACGCCGT CGAGGGCTTC GACCTCAATG CGGTGGATTA TTTGCTGAAA
CCCATTCCCT TCGAGCGTTT CCTGCGCGCG ATGGACAAGG TTTTTACAGG GCTGAACATC
ACCAACCAAT CCGTTTCAGT GGCGCAAAAG GCCGCGCAGG CGACCCAGGA TGTGTTTTTG
TATTTAAAAG TTGACCGTAA AATGGTGAAA GTGAACGTCA ATGACATTTA CTGGATCGAG
AGTTTGCGGG ATTACATCAA AGTAGTTTTG AAAGACAAGG CCCTCATTTC AAAACAAAAA
ATCAGCCTTT TGGAAGAATT GCTTCCCGAA GACGGGTTTA TCCGCATTCA CCGCTCTTTC
ATCGTCTCCG TGGACAAGGT CGAAAGCTAT CATTCGCACA AGCTCGAAAT CGACGGAAAG
GAGTTGCCCA TTGGCCGTAA CTTCCGCAAC GACTGCCAGC GCCGCTTCAA GCTCTCCTTT
TAA
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| Protein sequence | MKLKAILVDD EPHAIEILDN YLANFAEIEV AARCQDAIQA FQVLQQQKID LMFLDVKMPG
LKGTDLLRSL KNPPKVVFTT AYQDYAVEGF DLNAVDYLLK PIPFERFLRA MDKVFTGLNI
TNQSVSVAQK AAQATQDVFL YLKVDRKMVK VNVNDIYWIE SLRDYIKVVL KDKALISKQK
ISLLEELLPE DGFIRIHRSF IVSVDKVESY HSHKLEIDGK ELPIGRNFRN DCQRRFKLSF
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