Gene Dfer_4509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4509 
Symbol 
ID8228112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5441427 
End bp5442134 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content47% 
IMG OID644932355 
Productprotein of unknown function DUF1016 
Protein accessionYP_003088875 
Protein GI255038254 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.441335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT TCAAATCATT AGTATCAAGC ATCCAGGAAA CCAATGTGAC TCTCCAGCAA 
AGCGCTTCCA AAGCCATCAA CAGATACCTT ACCATCCGTA ATTGGCTGAT CGGCTTCCAC
ATTGTGGAAT TTGAACAGAA TGGAGAAGAT CGGGCAGAGT ACGGTCAGCG GCTAATTGAA
GAGTTGGCCA AAGCTTTGGA TACGGCCGGG CTAAGTGTAC GAAGCCTGAA ATTATTCCGA
CAATTCTATT TTACTTATCC CCAAACTGGG CAGACACTGT CTGCCCAATT CAAAAGTATG
CGTTCAATCA GGTTAAATGA CCTTCCTGCA AAGCTTGATA AGGTTAATGC GGTAAATGAA
CAAGGTGCCC GGTTTTCGGT AGATGCGCAA ATACTGCTTT CCAAATTGTC ATTTTCACAT
CTTGCTTTAC CACTCCCGCT GAAAGAGCCT GAGAAGCGCT CATTCTACGA GCGTCAGTGC
GTGATGGGGA ATTGGAGCGT TTCCGAACTC AAAAGGCAAA TCAATACCCT TTATTACGAA
CGCTCGGGAA TGAGCCTCGA TCCGGATGAA TTGGGCCGGG GCGTTGAGGA AAATGCGCAG
CGGCCCGGCA TTGCAGACAT TATCAAGTCG CCATTCACCT TTGAGTTTCT TGGGTTAAAA
GCGAAAGACG CGGTGTATGA AAATGAGCTG GCGCAGATGC GATCTTAG
 
Protein sequence
MTDFKSLVSS IQETNVTLQQ SASKAINRYL TIRNWLIGFH IVEFEQNGED RAEYGQRLIE 
ELAKALDTAG LSVRSLKLFR QFYFTYPQTG QTLSAQFKSM RSIRLNDLPA KLDKVNAVNE
QGARFSVDAQ ILLSKLSFSH LALPLPLKEP EKRSFYERQC VMGNWSVSEL KRQINTLYYE
RSGMSLDPDE LGRGVEENAQ RPGIADIIKS PFTFEFLGLK AKDAVYENEL AQMRS