Gene Dfer_4507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4507 
Symbol 
ID8228110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5438945 
End bp5440066 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content53% 
IMG OID644932353 
Productfatty acid hydroxylase 
Protein accessionYP_003088873 
Protein GI255038252 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.342952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGG ACAACGAAAC GGCGCGGAAA ATCACCCGCG ACGGTCTTAT CAGCGTGGCG 
CTCTACACTG CGCCGATTAT ACTGATGTTC GCAAGTTTCC AGATTTTCGA CTACCGGCCA
TGGGAGGGCA GCAATGCATT TCCGTTCAAA GCCCCGGCGT TTCTTGAGGC GGTTTTCAAA
AACCTGAGCA GTTGGGGTTT GCCGGTGATC GTGCTCACGC TGGGTGTGAT CGAATTCGCG
GCGGGGCTTT ATGAAAACAA ATGGACCAAG AACGAGCGCA TCCTCGACAT TGTGTGCTTT
GTGGTGCCGA AACTGGTCGT ACGGCCTTTT GTAGCCTATT TTGGACTAAA ACTTCTTCCT
GAAATCCTGC CGGGTGCCAA GAATGCGTTC GAATGGGTGC CGTTTTGGTG GGCATTTCTG
ATCATCGCCG TGGCCGACGA CCTTACGCAA TACTGGTATC ACCGCCTGCA CCATCAGGTG
CCGTGGCTGT GGCGCTTCCA CCGTACACAC CATTCGGCGC CTTATATGGG AATGGCAATG
GCCGGCCGCC AGAACATCAT TTACACGCTG TTTTTCTCGC AAACATACCT CACCGTCGCG
CTGACTTACC TCGGGCTTGG TTATGCCGCA TTGTTTGTGA AAGTGATTAA ATCGTTCATC
ACCACCGGCG CGCATTCAAG CATTCCCTGG GACAAACCGT TTTATGAAAA AAAATGGCTG
CAACCGATCG GCTGGGTATT GGAAAGGCTC ATTTCCACCC CTGCCACACA CCATGCACAC
CACGCCGATA CGAATGACGA CGGAATAGGG CATTACAAAG GCAATTTCGG GAACATGTTC
TTTCTTTGGG ACATTATTTT CGGAACGGGC ATCATTACCC GCAAATATCC GTCGAGCTAC
GGTATCAAGC ATTATCAGGA AGAAGAATGG TATGCGCAGT TTTTGTGGCC CATTCTCAAA
TCCAGAAAGG AAGGCAGCGA GCTATCTCAC AACGGTCCGG TCGTAGGCGA CGCCGTGCCC
GATACGCCCG AGCTCATTCC CCTGAAACCT GAACCAGCGA CTACCGCAGT ACCGACTGCC
GCAGTACCGA CTGCCGCAGT AACGACTGCC GCAGTCGCTT GA
 
Protein sequence
MKLDNETARK ITRDGLISVA LYTAPIILMF ASFQIFDYRP WEGSNAFPFK APAFLEAVFK 
NLSSWGLPVI VLTLGVIEFA AGLYENKWTK NERILDIVCF VVPKLVVRPF VAYFGLKLLP
EILPGAKNAF EWVPFWWAFL IIAVADDLTQ YWYHRLHHQV PWLWRFHRTH HSAPYMGMAM
AGRQNIIYTL FFSQTYLTVA LTYLGLGYAA LFVKVIKSFI TTGAHSSIPW DKPFYEKKWL
QPIGWVLERL ISTPATHHAH HADTNDDGIG HYKGNFGNMF FLWDIIFGTG IITRKYPSSY
GIKHYQEEEW YAQFLWPILK SRKEGSELSH NGPVVGDAVP DTPELIPLKP EPATTAVPTA
AVPTAAVTTA AVA