Gene Dfer_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4460 
Symbol 
ID8228063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5383364 
End bp5383780 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content49% 
IMG OID644932306 
Productprotein of unknown function DUF1232 
Protein accessionYP_003088826 
Protein GI255038205 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.441335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC GGATTTTAGA GTCGATTTTT TTCAAAAAAG CTACTGGAAA AGCAGGACGG 
TACGCCAGAA ACTCCACCCG GTTGTTCGAA CTACTCAAAG AGGTGGTAGG TAAGCTGCAG
ACCGTCGGCG TGAAGGAAAA CCTTTCCGAT TTTCAAACCA ATGTACTGCT CCTGATGCGC
ATGGTGAGGG CCTACGCTTC CGGCGAATAT AAACAGCTTC CGTGGAAAAG TTTGGTGTCG
ATAGTCGCTG TGCTCATTTA TTTCGTATCT CCCATAGACC TGATCCCTGA CTTCCTGCCG
GTTATCGGTA TTACCGACGA CGTGGCGCTG GTGGTGTGGC TCGTGAAAAC GCTGGGCGGC
GATATCCGGA AATTTGCCGA TTGGGAGAAG GCCAGCAAGA CAATTAATAT CGGATAA
 
Protein sequence
MISRILESIF FKKATGKAGR YARNSTRLFE LLKEVVGKLQ TVGVKENLSD FQTNVLLLMR 
MVRAYASGEY KQLPWKSLVS IVAVLIYFVS PIDLIPDFLP VIGITDDVAL VVWLVKTLGG
DIRKFADWEK ASKTINIG