Gene Dfer_4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4451 
Symbol 
ID8228054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5367989 
End bp5368969 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID644932297 
ProductKelch repeat-containing protein 
Protein accessionYP_003088817 
Protein GI255038196 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0538307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.756619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC TCTACTACAA AGCTGCCTTG CTGATCGCGC TGAATGCATT CGCGATTCGG 
ACACAGGCGC AGATATGGAC GGTTTCGGAG CCCGAAAACC TCCCTGAAAA AAGACATGAG
AATGCGATGG CAACGGCCAA CGGAAAACTA TACCTGCTCG GCGGCCGGGG TGTCAAGCCG
GTGGATGAAT ATGACCTGAA AAAAGACTCC TGGAAGAGCC TGGCGCCATC GCCGATCGAA
ATGAGCCATT TCCAAGCGGT AACTTATAAA AACGAGATTT ATGTGCTCGG TGCATTCACG
GGCGGCTATC CCCACGAAGT GCCGATCCCG GATATTTACA TTTTCAATCC CATCAAAAAT
GAATGGCGCA AAGGTGCCGC CATCCCTGAG AACAGAAGGC GTGGCGCGGC GGGTGCATTT
GTGCTGAATG ACAAAATTTA CCTCGTTTGC GGCATTCAGG ACGGCCACTG GGACGGCCAC
GTGACCTGGT TCGATGAGTT CGATCCGGCA ACTGGTACCT GGAAAACGCT CCCCGAAGCG
CCCCGCCCGC GGGACCACGT GCAGGTGGCG GTGCTGGACA GTAAACTTTA TGTTGCGGGC
GGGCGCTTGT CCACGGCGCG CATTAACCAG GTTTTGAATA CCGTTATCAA GGAAGTGGAT
GTGTATGATT TCAAAACCGG CAAATGGTCG ACGATGGACG CATCCAACAA CCTTCCTACG
CTGCGTGCCG GCAATACAAC CGTTGTTTTC AATAACAAAA TACTGGTAAT CGGCGGCGAA
AGTGATGCGC ATCTCGAAGC GCATAACGAA GTGGAGGCGT TTAATCCGCA AAGCCAGAAA
TGGGAAAAAC TGCCTTCGCT GCATCAGGGA CGCCACGGCA CACAGGCCGT CTCGCTCAAC
CGGAAAGTCT ACATTGCCGC AGGCTCGGCC AACCGCGGCG GCGGGCCGGA GCTTAACGAC
ATGGAAATAC TCGATAAATA A
 
Protein sequence
MKLLYYKAAL LIALNAFAIR TQAQIWTVSE PENLPEKRHE NAMATANGKL YLLGGRGVKP 
VDEYDLKKDS WKSLAPSPIE MSHFQAVTYK NEIYVLGAFT GGYPHEVPIP DIYIFNPIKN
EWRKGAAIPE NRRRGAAGAF VLNDKIYLVC GIQDGHWDGH VTWFDEFDPA TGTWKTLPEA
PRPRDHVQVA VLDSKLYVAG GRLSTARINQ VLNTVIKEVD VYDFKTGKWS TMDASNNLPT
LRAGNTTVVF NNKILVIGGE SDAHLEAHNE VEAFNPQSQK WEKLPSLHQG RHGTQAVSLN
RKVYIAAGSA NRGGGPELND MEILDK