Gene Dfer_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4432 
Symbol 
ID8228035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5349745 
End bp5350572 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content48% 
IMG OID644932278 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003088798 
Protein GI255038177 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.230876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCT ACTCCGAAGA AGACATTCAA GCTTTTGATA ACGTCCGGTT TTTGCACATC 
AAAACTGCAA AGGCCGGACA TCTTTTTACC ATCACATTGG CCCGGACTGA AAAGCGCAAT
GCATTTACGC CTACGATGGC GGAAGAGATT GTTTATGCAT TGGCCTATGC GCATTATCAA
CCGGATGTCC GGTGCGTGGT TTTGAAAGCG GAAGGGCCGG TTTTCTGCGC TGGCGCTGAT
TTGAATGCTT TTCATGATCC TGCTGCTAAC ATAGAAAATG TTTCATTGCC ACGAATACAC
GAAGAGGCAC GAATGGGGGA TGCATTTAAC GAACTGCTCA AACCTTGCAT TGCGCAGGTG
GAAGGGCCGG TGCTGGCGGG CGGATTTCTG ATGATATGCG GCTGCACATT CGTTTTTAGT
GTGCCGGAGG CTACTTTCAG TTTGCCTGAG GTGAAACGTG GCATTTGGCC GATGCAGGTG
ATGGCGTCGC TCGCGCCGAT TTTATCGGAA AGGAAAATTC TGGAAATGTC GATTATAGGA
AAAGCTTATT CCGCGGAAGA AGCGCTGGAA ATGGGGCTGA TCACGCATTT AGCGGAAAAG
GAAAGGATAG CAGACGAAGT GAGTGCATTG GCCAATCAGA TTTGCAACAG CGCGCCGCTG
GCGATTCAAT CAGGAATGCG AAGTTTACAG GAATTGAAGA AAATTCCTCA AAATGAACAG
CATACATTCC TAAAAAGCAA ACTAGATGAA CTCCTGAAAA CAGAAGACGC CCAAGAAGGA
GCATCAGCCT TCAAAGAAAA GCGGGAACCA ATCTGGAGAG GAAAGTAA
 
Protein sequence
MRFYSEEDIQ AFDNVRFLHI KTAKAGHLFT ITLARTEKRN AFTPTMAEEI VYALAYAHYQ 
PDVRCVVLKA EGPVFCAGAD LNAFHDPAAN IENVSLPRIH EEARMGDAFN ELLKPCIAQV
EGPVLAGGFL MICGCTFVFS VPEATFSLPE VKRGIWPMQV MASLAPILSE RKILEMSIIG
KAYSAEEALE MGLITHLAEK ERIADEVSAL ANQICNSAPL AIQSGMRSLQ ELKKIPQNEQ
HTFLKSKLDE LLKTEDAQEG ASAFKEKREP IWRGK