Gene Dfer_4429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4429 
Symbol 
ID8228032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5346333 
End bp5347376 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content50% 
IMG OID644932275 
Productglutamate 5-kinase 
Protein accessionYP_003088795 
Protein GI255038174 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.198767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCCCA AAGTGTCAAA ACCTATTCTC GTCATAAAGT TCGGGACGGC CTCTATCACG 
CTTACTTCGG GTGAACCTGA TGTCAGGATC ATCTCGGAAA TAGCCCGGCA GGTTTCGGAA
ATCCATTCGC AATACCGCAT TATCATCGTT TCATCGGGTG CGGTGGGAGC TGGAAAGGCC
TATATCAATG ATTACAAAGG CACAATGACG CAGCGAAAGG CAGCCGCGTC GGTTGGTAAC
CCGCTGCTCG TCGGCCTGTA TGCTTCCTAT TTCGCCCCGA ATAATATTTA CATTGCGCAA
AGCCTTTGCG AGCGGCAGCA TTTCGCGAAC CGTAATAAAT TCCTGCAACT CAAAGAGACT
TTTGAAGAAC TCTGGTCGAA CGGCATTATC CCGATCGTGA ACGAAAACGA CGTGGTAAGC
GACCGTGAGC TGAAATTTTC GGATAATGAC GAGCTGGCCA CATTACTGGC CGTCGGTTTT
GGGGCTGAAT CGCTCATGTT CTGCACGTCT GTGGGCGGGT TATTGGATGA AGAGGGGCGA
ATCCTGCGGA ACGTATCCAA TGTGAACGAG GTTTTCAAGT TTGTCAGGAC TGATAAATCT
TTCCTCGGCC TCGGAGGAAT GGCGTCCAAG CTGACTTTTG CCAAGCTGGC TTCCAGAATG
GCAATCCGCG TGGTGATTTT TGGCATGAAT CAGCAAAATG AGCTGCTGAA TGCATTGAAA
GGCGAAGCAG GGACATTGAT TACGCCGGGC AAAAGCACAT TATCGGCGCG TAACCGCTGG
CTGGGAAGCG GCGGGCTTGT ATCCGGCACA TTGCGTGTGG ATGAAGGCGC GTCGAAAGCA
TTATTGAAGC GTAAAAGTTT GCTAGCGGTG GGTGTCACCG AAGTAACGGG CGATTTTGAA
GCGGGTGAAA TCATTGAAAT ATACTCGCCG GATGACGAAA TGATCGCCGT CGCGCGGGCG
CGGGAAACTT CCTCGGCGAT CCGCAGCAAC CTGAAAACAG TGAATTTTGA AGTGGCGCAT
GCCAATGATA TAGTTTTGTT ATAA
 
Protein sequence
MNPKVSKPIL VIKFGTASIT LTSGEPDVRI ISEIARQVSE IHSQYRIIIV SSGAVGAGKA 
YINDYKGTMT QRKAAASVGN PLLVGLYASY FAPNNIYIAQ SLCERQHFAN RNKFLQLKET
FEELWSNGII PIVNENDVVS DRELKFSDND ELATLLAVGF GAESLMFCTS VGGLLDEEGR
ILRNVSNVNE VFKFVRTDKS FLGLGGMASK LTFAKLASRM AIRVVIFGMN QQNELLNALK
GEAGTLITPG KSTLSARNRW LGSGGLVSGT LRVDEGASKA LLKRKSLLAV GVTEVTGDFE
AGEIIEIYSP DDEMIAVARA RETSSAIRSN LKTVNFEVAH ANDIVLL