Gene Dfer_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4425 
Symbol 
ID8228028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5343620 
End bp5344024 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content48% 
IMG OID644932271 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003088791 
Protein GI255038170 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TAGCAATCAA TATAGATGAG ATCACCATCA AGCCGATCAC CAGCCAGGCC 
GATTTCGAGG AAGCCGGAAA AGTGATTGAG GCACTGATGG ACGCCGATCT GCTGGAAAAC
GAGACGGAAC GTAAAAAGGC CCTGGATATC CTGGAAGCCA TCACAGTTCT GGCGATCGAT
TATGAGAAAA AGCATTATCC AATGCCGAAA CCCGATCCGA TCGAAGCGAT TAAGGAGCGC
ATGGAGCAGT TGCATTTGAG CAGGAAAGAC GTTGCTCCGT ACTTCGGTGG TGAAAACAGG
GTTTCAGAAG TATTGAATAA AAAACGAAGC CTGACGATCA AGATGATCAG GGAAATCAGT
AAGAATCTGG GCATACCGGC AGAAACACTG CTGGCAGCCA GCTGA
 
Protein sequence
MKALAINIDE ITIKPITSQA DFEEAGKVIE ALMDADLLEN ETERKKALDI LEAITVLAID 
YEKKHYPMPK PDPIEAIKER MEQLHLSRKD VAPYFGGENR VSEVLNKKRS LTIKMIREIS
KNLGIPAETL LAAS