| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4420 |
|---|
| Symbol | |
|---|
| ID | 8228023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5340196 |
|---|
| End bp | 5340582 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644932267 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_003088787 |
|---|
| Protein GI | 255038166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGTA CAGGGTTGGT AATTGATACC GGAATATTCA TCGAGTATTT GCGGAAACCG
GAAAAATCAA AGACAATCCT GGCGTCATTA CCAAACGACG CTTCGCTTTT TGTTTCGGCT
GTAACAGTTT ATGAATTGAT GATGGGAGCA ACCAACGATC AAAAGAAGAA GGACGTTCAA
ACCCTTCTTG ACGGAATTTC AATCCTGCCG TTCGACGAGG AAGTTTCTCT GAAAGCGGCA
GAAATTTATC ATAACCTGCG AAGGCGTAAC CTGATGATTG AATTCCGGGA CATATTTATC
GCTGCCACAG CCATCATTTT CCAATTGCCA ATCAAAACCT TGAACAAGGA CCATTTTCAA
CGAATCGAAA CATTGGAACT GGCCTGA
|
|---|
| Protein sequence | MESTGLVIDT GIFIEYLRKP EKSKTILASL PNDASLFVSA VTVYELMMGA TNDQKKKDVQ
TLLDGISILP FDEEVSLKAA EIYHNLRRRN LMIEFRDIFI AATAIIFQLP IKTLNKDHFQ
RIETLELA
|
|---|
| |