Gene Dfer_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4416 
Symbol 
ID8228019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5335694 
End bp5336842 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID644932263 
Productaminotransferase class V 
Protein accessionYP_003088783 
Protein GI255038162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT ATCTGGACAA TGCGGCTACG ACGCAGCTGG ACCCCGAGGT CCTGGAAGCG 
ATGCTGCCGC TGATGACCGA GCAATTCGGC AATCCCTCTT CGATTCACTC CTACGGTCGC
GCCGTTCGCT CATCCATCGA GCGCGCCAGA AAAAGCATTG CAGCCACTTT GAATGCGGCG
CCTGCCGAGA TATTTTTTAC ATCGGGCGGT ACGGAAGCAG ATAACACGGC CATTCGGTCG
AGCATCGAAA CTTTCGGTTT GCAGCATGCT ATTACGTCGC GCATCGAGCA CCACGCGGTG
CTGCACACAT TGGAACACCT CAAAAAACTG GGCATTATTG AGCTGAGTTT TGTGAAATTG
AATGAGAAAG GGGAGGTAGA CCTGGAACAT CTGGAATCGC TGCTGGCTTC CAAACCGCGT
TCACTGGTGT CCCTGATGCA TGGCAACAAC GAAATCGGCA ACCTGCTCGA TCTGGAAGCG
GTAGGCGACA TTTGCGAAAA ATATAACGCG ATTTTCCATA GCGACACTGT GCAGACGATG
GGCCATTACC GTCACGACCT GCAAAAGCTG AAAACGAATT TCATCGTCGG CGCAGCGCAT
AAGTTCAACG GCCCGAAAGG CATTGGGTTT TTGTACGTCC GTCCGGGGAT TAAGATCAAT
CCGTTCGTGC ACGGAGGCGC GCAGGAGCGT AACATGCGCG GGGGAACCGA AAACATTTAC
GGAATTGTAG GCCTCGCGAA AGCATTGGAA ATCGCTTATC GTGATATGGA CGCGCATCAG
GCGCACATCG AAGGGCTCAA AGGACGCATG ATCGCGAAGC TGAAAGAGGG GATTGACGGC
GTGCGGTTCA ACGGCAACTC AGCCGAGCTT GGCAAGAGCC TTTACACGGT CCTGAGCGTA
AGCCTGCCCC CGTCGGATAT CAGCGATATG CTGCTGTTTA ATCTCGACAT TGCAGGAATC
GCCGTTTCAG GCGGCAGCGC TTGTTCCAGC GGTACCGACA TTGGCTCGCA CGTGTTGAAT
GAGCTTAAAA TCGATGAAAA CCGTGCTAAT GTGCGTTTTT CGTTCGGGAA GTATAATACC
GAAGCCGATA TCGACTATGC AGCGGATACG CTGATCGGCC TTTACAAAAA GGAGAGCGTT
ATTCTGTAA
 
Protein sequence
MKVYLDNAAT TQLDPEVLEA MLPLMTEQFG NPSSIHSYGR AVRSSIERAR KSIAATLNAA 
PAEIFFTSGG TEADNTAIRS SIETFGLQHA ITSRIEHHAV LHTLEHLKKL GIIELSFVKL
NEKGEVDLEH LESLLASKPR SLVSLMHGNN EIGNLLDLEA VGDICEKYNA IFHSDTVQTM
GHYRHDLQKL KTNFIVGAAH KFNGPKGIGF LYVRPGIKIN PFVHGGAQER NMRGGTENIY
GIVGLAKALE IAYRDMDAHQ AHIEGLKGRM IAKLKEGIDG VRFNGNSAEL GKSLYTVLSV
SLPPSDISDM LLFNLDIAGI AVSGGSACSS GTDIGSHVLN ELKIDENRAN VRFSFGKYNT
EADIDYAADT LIGLYKKESV IL