Gene Dfer_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4411 
Symbol 
ID8228014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5329398 
End bp5330489 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content53% 
IMG OID644932258 
Productoxidoreductase domain protein 
Protein accessionYP_003088778 
Protein GI255038157 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATGA AAACACTTGT ATGCCTCTTT TTTGCTTTGC TCAGCATTTC TTCGATGGCA 
CAGAAACCCG TGCGCGTGGC AGTTGCCGGG CTGAGCCACG GACATGTAGG CTGGATCTTT
AACCGCAAAG ACAAGACTGA TATTCAGCTC GTGGGTATTT GGGAAACCAA TCCGGACCTC
GTGAAACAGT TTACCGAACG GTACAAGCTC GACCCCAAGC TATTTTATTC AGACCTCAAC
AAAATGCTCG ATGAAACGAA GCCGGAAGCG GTTTCCGCAT TCGGGGCGAT TAGCGAACAC
GTGGTGGTCG TGCGGGCATG TGCGCCGCGG AAGATCAGTG TGATGGTGGA AAAGCCGCTG
GCGACCACAT TCGCCGATGC CAGGGAAATC CAGCAACTCG CGACCAAGAA TAACATTCAT
GTGCTAACCA ACTACGAAAC CTCCTGGTAT GCCAGCAACC AGCACGTGAA CCAGCTGATC
CAGGACGGGA AACTGGGCGA AATCCGGAAG GTAATGGTGA ACGACGGCCA CCAGGGACCG
AAGGAAATCG GGGTAAGCAA GGAGTTTTTC GCTATTTTGA CCGACCCGGC CAAGAATGGC
GCCGGTGCAT TGGTGGATTT CGGCTGCTAT GGCGCCAACC TCATGACCTG GCTCATGAAG
GGCGAACGGC CGATTTCAGT TACCGCAGTG ACGCACCAGA ATAAGCCGGA TATTTACAAG
AATGTCGACG ATGAGGCGTC CATTATCCTA CAATATCCGA AAGCGCAATG CATTATCCAG
GGCTCGTGGA ACTGGTCGTT CGCGAGAAAG GATATGGAAG TGTACGGCAA CAAGGGCTAC
GCGGTGGCCG TGAATGCGAC CACCGTGCGC CAGCGTTTGC AGGAAAAAGC ACCCGAAGAA
ACATTGAAAC TCGAACCGCG CCCCGCTCCC TACACCGATC CATTCTCGGT GCTGGCCGAT
GTGGTGCAAG GCGGTTTGAA GCTCGATCAG AACGATTTGT ACGGGCTGCC TGTGAATGTG
ACCGTCGTAG AGATACTGGA AACAGCCAAA GAAGCGGCTA AAACCGGCAA AACCATCTTT
TTGAAAAAAT AA
 
Protein sequence
MIMKTLVCLF FALLSISSMA QKPVRVAVAG LSHGHVGWIF NRKDKTDIQL VGIWETNPDL 
VKQFTERYKL DPKLFYSDLN KMLDETKPEA VSAFGAISEH VVVVRACAPR KISVMVEKPL
ATTFADAREI QQLATKNNIH VLTNYETSWY ASNQHVNQLI QDGKLGEIRK VMVNDGHQGP
KEIGVSKEFF AILTDPAKNG AGALVDFGCY GANLMTWLMK GERPISVTAV THQNKPDIYK
NVDDEASIIL QYPKAQCIIQ GSWNWSFARK DMEVYGNKGY AVAVNATTVR QRLQEKAPEE
TLKLEPRPAP YTDPFSVLAD VVQGGLKLDQ NDLYGLPVNV TVVEILETAK EAAKTGKTIF
LKK