Gene Dfer_4410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4410 
Symbol 
ID8228013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5328033 
End bp5329391 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content53% 
IMG OID644932257 
Producthypothetical protein 
Protein accessionYP_003088777 
Protein GI255038156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TGCGCATTTT TTTGAAAGTC ATCGGGATAT TCCTGCTGTT GCTCGTACTA 
GCCATTTCCA CCATGATAAC GACGATGGAC GACACGCCGT ATCAGGAAAT GGCTTACTAT
AAAGAGTGGA AAACGCTTAT TGGCGGTGTG AAGCCCGTTT CCGGCCCGGC CGACACGACG
GGCGCATTGC AAGTAGGTTG GGCAAAAGTG AACATTACAC CCGCCTCGCC CACGCCAACG
GCAGGTTACG GCAATCGCCG AGGCAAGCAT TACACCACCG TGCACGACTC CGTATATGTA
CGTGCGATGG TGATCGACAA CGGCCAAACC AAGGCAGCCA TCATCGCCGC CGACCTGCTC
ATCATACCGC CCACGGTCAT CAAATCCTTC AAGAAAAAGC TGAAACCGGG CGATATTCCT
TTTGAGCAGA TTTTTTTCGG CGCTACGCAT AGCCATAATA GTGTAGGCGG CTGGGGGACA
GGCGTTTCGT CGCTGTTTTT TTCGGGTAAA TATGATCCGG CCATTGTTGA AAAGCTGGCC
AATGCATTCC ACAAAGCCAT TACCGATGCG CAGCAAAAAG TGGAGCCGGT GCAGTTAACC
TACATGGAAT CGCTCGATTC GCTCGACATT CGCAACCGGC TGGTAGGCGA GGAGGGGAGC
ATCGATCCTG AAATCCGCTC GGCTGCGTTT GTGACCAAAA GCGGGCAGAA GGCCATTCTC
AGCTCATTCG CCGCGCATTC CACGGTTTTG AATTCCAAAA ACATCGTCCT CTCCCGCGAC
TACCCGGGCG CACTCGTGGA TTCGCTGGAA AAAGGACGCT ATGATTTTGC GATGTACATG
GCCGGCGCAG TGGGCAGCAT GGGGCCGATC GAGCAGGGAA CGGATGATTT TGATGAAGTG
AAAAACCAGG CATTCGGCGT GCAGAAAGCA TTGCTGTCGC CCGATGCGAA AAAGGAGAAC
GCGAATAACT CGGTCGTTCA GGCATTGACA TTACCATTAC CCCTCCGCGA GCCGACGCCG
CGGTTGACAA TGAACATCGT GCTGCGCCCG TGGGCATTCA AAAAGGCATT CGGCGAATAC
CCGGTGTTTG TGAAAGCATT GCGCGTTGGC AATATTTTAA TGGTTGGAAT GCCCTGCGAC
TTTTCCGGCG AGCTCACCGG CCCGCTCGAT GCCTATGCCA AAAGCAAAGG CCTGAACCTG
ATGGTAACGA GTTTCAACGG CGGCTACATC GGATACATTA CCCACGACAA GCATTTCAAC
CGCGATTTGT ACGAAACCAA AACCATGAGC TGGTATGGGC CGTACAATGG TGCCTATTTG
CAGGAAGTGA TCCGGGACAT TATTGATAAA TTATCCTAA
 
Protein sequence
MKVLRIFLKV IGIFLLLLVL AISTMITTMD DTPYQEMAYY KEWKTLIGGV KPVSGPADTT 
GALQVGWAKV NITPASPTPT AGYGNRRGKH YTTVHDSVYV RAMVIDNGQT KAAIIAADLL
IIPPTVIKSF KKKLKPGDIP FEQIFFGATH SHNSVGGWGT GVSSLFFSGK YDPAIVEKLA
NAFHKAITDA QQKVEPVQLT YMESLDSLDI RNRLVGEEGS IDPEIRSAAF VTKSGQKAIL
SSFAAHSTVL NSKNIVLSRD YPGALVDSLE KGRYDFAMYM AGAVGSMGPI EQGTDDFDEV
KNQAFGVQKA LLSPDAKKEN ANNSVVQALT LPLPLREPTP RLTMNIVLRP WAFKKAFGEY
PVFVKALRVG NILMVGMPCD FSGELTGPLD AYAKSKGLNL MVTSFNGGYI GYITHDKHFN
RDLYETKTMS WYGPYNGAYL QEVIRDIIDK LS