Gene Dfer_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4396 
Symbol 
ID8227999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5310403 
End bp5311008 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID644932243 
ProductThymidine kinase 
Protein accessionYP_003088763 
Protein GI255038142 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTAG AACCATCTCA CAGAAGAGAA TTCCAAAATC CTCGTACCGG CTGGATCGAA 
GTCATTTGCG GCTCGATGTT TTCCGGCAAA ACCGAAGAAC TGATCCGCCT GCTCAACCGT
GCCAGAATTG CCCGGCAAAG GATTCAGATT TTCAAACCTG CGCTTGATAA ACGATACCAC
GAAGAGAACA TTGTTTCTCA TAATGACAAT TCGATCCCCT CGATACCCGT ACAATCTTCG
CAGCAAATAT CAGACCTGGC GCAGGATTGC GAGGTGGTGG GCATCGACGA AGCCCAGTTT
TTCGACGAGG GAATTCTGGC CGTATGCGAC CAGCTGGCCA ATTCGGGCAA GCGTGTGATC
GTGGCCGGCC TCGACATGGA TTATATGGGC AAACCCTTCG GCTGCATGCC GCAGTTGATG
GCCATTGCGG AATATGTCAC CAAAGTACAC GCGGTATGCA TGGTGTGTGG GGAGGTGGCT
TCGCATTCCT ACCGGCTGTC GCCATCGAAC GAACGGGTGC TGCTCGGCGA GACGGATCAC
TACGAAGCTC GCTGCCGCAG GTGTTTCAAT CTGGGTGAAA AAGCGACCGA ACTCTTTTCG
CGATGA
 
Protein sequence
MFVEPSHRRE FQNPRTGWIE VICGSMFSGK TEELIRLLNR ARIARQRIQI FKPALDKRYH 
EENIVSHNDN SIPSIPVQSS QQISDLAQDC EVVGIDEAQF FDEGILAVCD QLANSGKRVI
VAGLDMDYMG KPFGCMPQLM AIAEYVTKVH AVCMVCGEVA SHSYRLSPSN ERVLLGETDH
YEARCRRCFN LGEKATELFS R