| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4390 |
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| Symbol | |
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| ID | 8227993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5303882 |
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| End bp | 5304526 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644932237 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_003088757 |
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| Protein GI | 255038136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000436364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAA AATTGATGGC AATTCTGGTC GTGATGACCA TTATCACCAC CCCTCTTTTA
GCCCAGACCA CCCCGGCAGG CGGGCCAACT AAGATCGGTT ATACTAACGT TGACTATATA
ATCGGCAAAT TGCCAGAGGC AAAAGTGATG CAAAACCAGC TGGAAGTAAC CAAAGCTCAG
CTGGACAAAG CCATCGGGGA AACTTATAAA GAGGCTCAGG AGAAATACGA AGCATATCAG
AAAAACGGTG CGAACATGAC CGACGTCATC CGTGCCGACA AAGAAAAAGA GCTTCAAAAC
CTCTCAACGC GCATCGAAGA AATGCGTAAC AATGCGCAGA CTTCCCTGCA AACAAAACAG
CAGCAGCTGC TCGAACCGAT CCTGACGAAG GTGAACAATG CGATCCAGGA AGTAGGTAAA
GAAGCTGGTT TCCTCTACAT CCTGAACATG GATGCAGGTG CAGGAACTAC GCCGATCATC
CTTTTCGCGG CATCGGAAGA AAACAATGCA ACTAACCTGA TCCTTCGTAA ACTGGGTGTT
GATCCCGACA AAGTAGAAGC AGCAGCACCG GCCGCTACCA CACCGGCAGC GAAACCAGCT
ACAACACCTG CTACCACTCC GGCCACTACC CCGAAGAAAA AATAA
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| Protein sequence | MKQKLMAILV VMTIITTPLL AQTTPAGGPT KIGYTNVDYI IGKLPEAKVM QNQLEVTKAQ
LDKAIGETYK EAQEKYEAYQ KNGANMTDVI RADKEKELQN LSTRIEEMRN NAQTSLQTKQ
QQLLEPILTK VNNAIQEVGK EAGFLYILNM DAGAGTTPII LFAASEENNA TNLILRKLGV
DPDKVEAAAP AATTPAAKPA TTPATTPATT PKKK
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